GapMind for catabolism of small carbon sources

 

Other Characterized Proteins Similar to araE

Finding the characterized proteins for araE (L-arabinose:H+ symporter) in L-arabinose catabolism

Or see clustering for step araE

Or see all steps for L-arabinose catabolism

Or cluster curated proteins matching a keyword

Definition of araE

Fetched 3 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 3 other characterized sequences. (Found 6 hits including self hits.)

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for araE.)

b2943 galactose:H+ symporter from Escherichia coli K-12 substr. MG1655
GALP_ECOLI / P0AEP1 Galactose-proton symporter; Galactose transporter from Escherichia coli (strain K12)
TC 2.A.1.1.1 / P0AEP1 Galactose:H+ symporter, GalP. Also transports glucose, xylose, fucose (6-deoxygalactose), 2-deoxygalactose and 2-deoxyglucose) (Henderson and Giddens 1977; from Escherichia coli (strain K12)
P0AEP1 galactose:H+ symporter from Escherichia coli (strain K12)
b2943 galactose:H+ symporter (galP) from Escherichia coli BW25113
PFams: TRI12, Sugar_tr, MFS_1, MFS_2, MFS_1
464 amino acids: PaperBLAST, CDD, SwissProt::P0AEP1
65% identical to

b2841 arabinose:H+ symporter from Escherichia coli K-12 substr. MG1655
ARAE_ECOLI / P0AE24 Arabinose-proton symporter; Arabinose transporter from Escherichia coli (strain K12)
TC 2.A.1.1.2 / P0AE24 Arabinose (xylose; galactose):H+ symporter, AraE (low affinity high capacity) from Escherichia coli
P0AE24 arabinose:H+ symporter from Escherichia coli (strain K12)
PFams: TRI12, Sugar_tr, MFS_1
472 amino acids: PaperBLAST, CDD

XYLT_LACBR / O52733 D-xylose transporter; D-xylose-proton symporter from Lactobacillus brevis
TC 2.A.1.1.41 / O52733 The D-xylose:H+ symporter, XylT (Km=220 μM; inhibited competitively by 6-deoxyglucose (Ki=220 μM), but not by other sugars tested) from Lactobacillus brevis
PFams: Sugar_tr, MFS_1, TRI12
457 amino acids: PaperBLAST, CDD, SwissProt::O52733
40% identical to

ARAE_BACSU / P96710 Arabinose-proton symporter; Arabinose transporter from Bacillus subtilis (strain 168)
TC 2.A.1.1.55 / P96710 L-arabinose:proton symporter, AraE (Sa-Nogueira and Ramos, 1997). Also transports xylose, galactose and α-1,5 arabinobiose from Bacillus subtilis
PFams: Sugar_tr, MFS_1, MFS_1
464 amino acids: PaperBLAST, CDD

TC 2.A.1.1.106 / P46333 Probable metabolite transport protein CsbC from Bacillus subtilis (strain 168)
PFams: Sugar_tr, MFS_1, TRI12, MFS_1
461 amino acids: PaperBLAST, CDD, TCDB::P46333
41% identical to

TC 2.A.1.1.116 / C4B4V9 Arabinose/xylose transporter, AraE from Corynebacterium glutamicum
PFams: Sugar_tr, MFS_1, MFS_2, MFS_1
479 amino acids: PaperBLAST, CDD