Clusters of Characterized Proteins

Clustering the characterized proteins for xacE (2-dehydro-3-deoxy-L-arabinonate dehydratase) in L-arabinose catabolism

Or see other characterized proteins similar to xacE

Or see all steps for L-arabinose catabolism

Or cluster curated proteins matching a keyword

Definition of xacE

• Curated proteins or TIGRFams with EC 4.2.1.43

Fetched 10 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 10 of these sequences

Found 2 clusters of similar sequences. Download as table or as draft rules or view by cluster

Acidovorax GW101-3H11

Ac3H11_603 L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) from Acidovorax sp. GW101-3H11
PFams: DHDPS
294 amino acids: PaperBLAST, CDD (Cluster 2)

Azospirillum brasilense

KDADA_AZOBR / Q1JUQ0 L-2-keto-3-deoxyarabonate dehydratase; L-KDA dehydratase; 2-dehydro-3-deoxy-L-arabinonate dehydratase; L-2-keto-3-deoxyarabinonate dehydratase; EC 4.2.1.43 from Azospirillum brasilense
Q1JUQ0 2-dehydro-3-deoxy-L-arabinonate dehydratase (EC 4.2.1.43) from Azospirillum brasilense
PFams: DHDPS
309 amino acids: PaperBLAST, CDD (Cluster 2)

Burkholderia phytofirmans

BPHYT_RS22715 L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) from Burkholderia phytofirmans PsJN
PFams: DHDPS
310 amino acids: PaperBLAST, CDD (Cluster 2)

Herbaspirillum seropedicae

HSERO_RS06870 L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) from Herbaspirillum seropedicae SmR1
PFams: DHDPS
306 amino acids: PaperBLAST, CDD (Cluster 2)

Pseudomonas aeruginosa

Q9I1Q1 2-keto-3-deoxy-L-lyxonate dehydratase (EC 4.2.1.43) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
331 amino acids: PaperBLAST, CDD (Cluster 1)

Pseudomonas fluorescens

PfGW456L13_3317 2-dehydro-3-deoxy-L-arabinonate dehydratase (EC 4.2.1.43) from Pseudomonas fluorescens GW456-L13
330 amino acids: PaperBLAST, CDD (Cluster 1)

Pf1N1B4_4623 2-dehydro-3-deoxy-L-arabinonate dehydratase (EC 4.2.1.43) from Pseudomonas fluorescens FW300-N1B4
330 amino acids: PaperBLAST, CDD (Cluster 1)

AO356_24595 2-dehydro-3-deoxy-L-arabinonate dehydratase (EC 4.2.1.43) from Pseudomonas fluorescens FW300-N2C3
330 amino acids: PaperBLAST, CDD (Cluster 1)

Pf6N2E2_611 2-dehydro-3-deoxy-L-arabinonate dehydratase (EC 4.2.1.43) from Pseudomonas fluorescens FW300-N2E2
330 amino acids: PaperBLAST, CDD (Cluster 1)

Sinorhizobium meliloti

SM_b20892 2-dehydro-3-deoxy-L-arabinonate dehydratase (EC 4.2.1.43) from Sinorhizobium meliloti 1021
331 amino acids: PaperBLAST, CDD (Cluster 1)