Clusters of Characterized Proteins

Clustering the characterized proteins for arcA (arginine deiminase) in L-arginine catabolism

Or see other characterized proteins similar to arcA

Or see all steps for L-arginine catabolism

Or cluster curated proteins matching a keyword

Definition of arcA

• Curated proteins or TIGRFams with EC 3.5.3.6
• Ignore hits to GFF1616 when looking for 'other' hits (arginine deiminase (EC 3.5.3.6))
• Ignore hits to GFF3434 when looking for 'other' hits (arginine deiminase (EC 3.5.3.6))
• Ignore hits to AO353_25635 when looking for 'other' hits (arginine deiminase (EC 3.5.3.6))
• Comment: Some diverged members of this family had been reannotated as arginine deiminases, putatively involved in citrulline catabolism by the reverse reaction. However, the reverse reaction is thermodynamically quite unfavorable; more likely, these proteins have a different function

Fetched 10 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 8 of these sequences

Found 1 clusters of similar sequences. Another 2 sequences are not clustered. Download as table or as draft rules or view by cluster

Enterococcus faecalis

GI|14349116 arginine deiminase; EC 3.5.3.6 from Enterococcus faecalis
PFams: Amidinotransf
408 amino acids: PaperBLAST, CDD (Cluster 1)

Giardia intestinalis

Q27657 arginine deiminase subunit (EC 3.5.3.6) from Giardia intestinalis
Q27657 arginine deiminase (EC 3.5.3.6) from Giardia intestinalis
PFams: Amidinotransf
580 amino acids: PaperBLAST, CDD (Singleton 1)

Halobacterium salinarum

ARCA_HALS3 / B0R9X5 Arginine deiminase; ADI; Arginine dihydrolase; AD; EC 3.5.3.6 from Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1)
PFams: Amidinotransf, Amidinotransf
486 amino acids: PaperBLAST, CDD (Singleton 2)

Lactococcus lactis

Q2HYA0 arginine deiminase (EC 3.5.3.6) from Lactococcus lactis ssp. lactis
PFams: Amidinotransf
410 amino acids: PaperBLAST, CDD (Cluster 1)

Mycoplasma penetrans

Q8EVF6 arginine deiminase (EC 3.5.3.6) from Mycoplasma penetrans
PFams: Amidinotransf
452 amino acids: PaperBLAST, CDD (Cluster 1)

Pseudomonas aeruginosa

P13981 arginine deiminase (EC 3.5.3.6) from Pseudomonas aeruginosa
PFams: Amidinotransf
418 amino acids: PaperBLAST, CDD (Cluster 1)

Pseudomonas plecoglossicida

A7LKB0 arginine deiminase (EC 3.5.3.6) from Pseudomonas plecoglossicida
PFams: Amidinotransf
417 amino acids: PaperBLAST, CDD (Cluster 1)

Streptococcus gordonii

ARCA_STRGC / A8AYL1 Arginine deiminase; ADI; Arginine dihydrolase; AD; EC 3.5.3.6 from Streptococcus gordonii (strain Challis / ATCC 35105 / BCRC 15272 / CH1 / DL1 / V288)
PFams: Amidinotransf
409 amino acids: PaperBLAST, CDD (Cluster 1)

Streptococcus pyogenes

B5XMC3 arginine deiminase (EC 3.5.3.6) from Streptococcus pyogenes
PFams: Amidinotransf
411 amino acids: PaperBLAST, CDD (Cluster 1)

ARCA_STRPY / P0C0B3 Arginine deiminase; ADI; Arginine dihydrolase; AD; Streptococcal acid glycoprotein; EC 3.5.3.6 from Streptococcus pyogenes
PFams: Amidinotransf
411 amino acids: PaperBLAST, CDD (Cluster 1)