GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for bgtB (L-arginine ABC transporter, fused substrate-binding and permease components (BgtB/BgtAB)) in L-arginine catabolism

Or see other characterized proteins similar to bgtB

Or see all steps for L-arginine catabolism

Or cluster curated proteins matching a keyword

Definition of bgtB

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 501-530 amino acids (1/2 heteromeric)

The first sequence in each cluster is the seed.

TC 3.A.1.3.12 / P73544 BgtB aka GLNH aka SLL1270, component of Arginine/lysine/histidine/glutamine porter
PFams: SBP_bac_3, BPD_transp_1
Heteromeric, 530 amino acids: PaperBLAST, CDD, Compare to cluster

TC 3.A.1.3.17 / Q8YSA2 Basic amino acid uptake transporter, BgtAB
PFams: SBP_bac_3, Lig_chan-Glu_bd, BPD_transp_1
501 amino acids: PaperBLAST, CDD, Compare to cluster