Clusters of Characterized Proteins

GapMind for catabolism of small carbon sources

Clusters of Characterized Proteins

Clustering the characterized proteins for ortA (2-amino-4-oxopentanoate thiolase, alpha subunit) in L-arginine catabolism

Or see other characterized proteins similar to ortA

Or see all steps for L-arginine catabolism

Or cluster curated proteins matching a keyword

Definition of ortA

Curated sequence C1FW06: 2-amino-4-ketopentanoate thiolase alpha subunit; AKP thiolase; AKPT; EC 2.3.1.263. 2-amino-4-oxopentanoate thiolase (subunit 1/2) (EC 2.3.1.263). AKP thiolase α subunit (EC 2.3.1.263)
Curated sequence E3PY98: 2-amino-4-ketopentanoate thiolase alpha subunit; AKP thiolase; AKPT; EC 2.3.1.263
Ignore hits to items matching 2.3.1.263 when looking for 'other' hits
Comment: 2-amino-4-oxopentanoate thiolase (2.3.1.263) is heteromeric

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by cluster

Acetoanaerobium sticklandii

C1FW06 AKP thiolase α subunit (EC 2.3.1.263) from Unknown prokaryotic organism
ORTA_UNKP / C1FW06 2-amino-4-ketopentanoate thiolase alpha subunit; AKP thiolase; AKPT; EC 2.3.1.263 from Unknown prokaryotic organism
C1FW06 2-amino-4-oxopentanoate thiolase (subunit 1/2) (EC 2.3.1.263) from Acetoanaerobium sticklandii
Heteromeric, 101 amino acids: PaperBLAST, CDD (Cluster 1)

ORTA_ACESD / E3PY98 2-amino-4-ketopentanoate thiolase alpha subunit; AKP thiolase; AKPT; EC 2.3.1.263 from Acetoanaerobium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIMB 10654) (Clostridium sticklandii)
Heteromeric, 101 amino acids: PaperBLAST, CDD (Cluster 1)