GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for patD (gamma-aminobutyraldehyde dehydrogenase) in L-arginine catabolism

Or see other characterized proteins similar to patD

Or see all steps for L-arginine catabolism

Or cluster curated proteins matching a keyword

Definition of patD

Fetched 14 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 14 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by cluster

Arabidopsis thaliana

Q9S795 aminobutyraldehyde dehydrogenase (EC 1.2.1.19); betaine-aldehyde dehydrogenase (EC 1.2.1.8) from Arabidopsis thaliana
PFams: Aldedh
501 amino acids: PaperBLAST, CDD (Cluster 1)

Q9STS1 aminobutyraldehyde dehydrogenase (EC 1.2.1.19); betaine-aldehyde dehydrogenase (EC 1.2.1.8) from Arabidopsis thaliana
Q9STS1 betaine aldehyde / aminoaldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.8) from Arabidopsis thaliana
PFams: Aldedh
503 amino acids: PaperBLAST, CDD (Cluster 1)

Escherichia coli

b1300 γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli K-12 substr. MG1655
PUUC_ECOLI / P23883 NADP/NAD-dependent aldehyde dehydrogenase PuuC; ALDH; 3-hydroxypropionaldehyde dehydrogenase; Gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Gamma-Glu-gamma-aminobutyraldehyde dehydrogenase; EC 1.2.1.5 from Escherichia coli (strain K12)
P23883 4-(gamma-glutamylamino)butanal dehydrogenase (EC 1.2.1.99) from Escherichia coli
P23883 γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli (strain K12)
PFams: Aldedh
495 amino acids: PaperBLAST, CDD (Cluster 1)

b1444 γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli K-12 substr. MG1655
ABDH_ECOLI / P77674 Gamma-aminobutyraldehyde dehydrogenase; ABALDH; 1-pyrroline dehydrogenase; 4-aminobutanal dehydrogenase; 5-aminopentanal dehydrogenase; EC 1.2.1.19; EC 1.2.1.- from Escherichia coli (strain K12)
P77674 aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli
P77674 γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli (strain K12)
PFams: Aldedh
474 amino acids: PaperBLAST, CDD (Cluster 1)

Homo sapiens

AL9A1_HUMAN / P49189 4-trimethylaminobutyraldehyde dehydrogenase; TMABA-DH; TMABALDH; Aldehyde dehydrogenase E3 isozyme; Aldehyde dehydrogenase family 9 member A1; Gamma-aminobutyraldehyde dehydrogenase; R-aminobutyraldehyde dehydrogenase; EC 1.2.1.47; EC 1.2.1.3; EC 1.2.1.19 from Homo sapiens (Human)
P49189 4-trimethylammoniobutyraldehyde dehydrogenase (EC 1.2.1.47) from Homo sapiens
P49189 aldehyde dehydrogenase, E3 isozyme (EC 1.2.1.19; EC 1.2.1.3; EC 1.2.1.47) from Homo sapiens
PFams: Aldedh
494 amino acids: PaperBLAST, CDD (Cluster 1)

Malus domestica

A0A0E3T3B5 aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Malus domestica
PFams: Aldedh
503 amino acids: PaperBLAST, CDD (Cluster 1)

A0A0E3T552 aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Malus domestica
PFams: Aldedh
503 amino acids: PaperBLAST, CDD (Cluster 1)

Pisum sativum

Q8VWZ1 aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Pisum sativum
PFams: Aldedh, DUF1487
503 amino acids: PaperBLAST, CDD (Cluster 1)

Q93YB2 aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Pisum sativum
PFams: Aldedh
503 amino acids: PaperBLAST, CDD (Cluster 1)

Rattus norvegicus

AL9A1_RAT / Q9JLJ3 4-trimethylaminobutyraldehyde dehydrogenase; TMABA-DH; TMABADH; Aldehyde dehydrogenase family 9 member A1; Gamma-aminobutyraldehyde dehydrogenase; EC 1.2.1.47; EC 1.2.1.3; EC 1.2.1.19 from Rattus norvegicus (Rat)
Q9JLJ3 4-trimethylammoniobutyraldehyde dehydrogenase (EC 1.2.1.47) from Rattus norvegicus
Q9JLJ3 γ-trimethylaminobutyraldehyde dehydrogenase (EC 1.2.1.47) from Rattus norvegicus
PFams: Aldedh
494 amino acids: PaperBLAST, CDD (Cluster 1)

Solanum lycopersicum

B6ECN9 aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Solanum lycopersicum
PFams: Aldedh
505 amino acids: PaperBLAST, CDD (Cluster 1)

Zea mays

C0P9J6 aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Zea mays
PFams: Aldedh
505 amino acids: PaperBLAST, CDD (Cluster 1)

C6KEM4 aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Zea mays
PFams: Aldedh
506 amino acids: PaperBLAST, CDD (Cluster 1)

G5DDC2 aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Zea mays
PFams: Aldedh
506 amino acids: PaperBLAST, CDD (Cluster 1)