Clustering the characterized proteins for prdB (D-proline reductase, prdB component) in L-arginine catabolism
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Definition of prdB
Fetched 2 sequences
Running BLASTp
Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences
Found 1 clusters of similar sequences. Download as table or as draft rules or view by cluster
Q9Z4Q7 26-kDa subunit from Acetoanaerobium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIMB 10654)
PRDB_ACESD / Q9Z4Q7 D-proline reductase subunit gamma; D-proline reductase 26 kDa subunit; EC 1.21.4.1 from Acetoanaerobium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIMB 10654) (Clostridium sticklandii)
SP|Q9Z4Q7 D-proline reductase, PrdB subunit, selenocysteine-containing; EC 1.21.4.1 from Clostridium sticklandii
PFams: GRDB
242 amino acids: PaperBLAST, CDD (Cluster 1)
Q17ZY6 D-proline reductase (EC 1.21.4.1) from Clostridioides difficile
PFams: GRDB
241 amino acids: PaperBLAST, CDD (Cluster 1)
Q9Z4Q7 26-kDa subunit from Acetoanaerobium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIMB 10654)
PRDB_ACESD / Q9Z4Q7 D-proline reductase subunit gamma; D-proline reductase 26 kDa subunit; EC 1.21.4.1 from Acetoanaerobium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIMB 10654) (Clostridium sticklandii)
SP|Q9Z4Q7 D-proline reductase, PrdB subunit, selenocysteine-containing; EC 1.21.4.1 from Clostridium sticklandii
PFams: GRDB
242 amino acids: PaperBLAST, CDD (Cluster 1)