GapMind for catabolism of small carbon sources


Other Characterized Proteins Similar to aatJ

Finding the characterized proteins for aatJ (aspartate/asparagine ABC transporter, substrate-binding component AatJ) in L-asparagine catabolism

Or see clustering for step aatJ

Or see all steps for L-asparagine catabolism

Or cluster curated proteins matching a keyword

Definition of aatJ

Fetched 5 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 1 other characterized sequences. (Found 6 hits including self hits.)

Removing ignored items reduces this to 0 close sequences.

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for aatJ.)

TC 3.A.1.3.22 / Q9I402 Probable binding protein component of ABC transporter, component of Amino acid transporter, AatJMQP. Probably transports L-glutamic acid, D-glutamine acid, L-glutamine and N-acetyl L-glutamic acid (Johnson et al. 2008). Very similar to 3.A.1.3.19 of P. putida from Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
PFams: SBP_bac_3
Heteromeric, 302 amino acids: PaperBLAST, CDD, TCDB::Q9I402
79% identical to

PfGW456L13_4770 ABC transporter for L-Asparagine and possibly other L-amino acids, periplasmic substrate-binding component from Pseudomonas fluorescens GW456-L13
PFams: SBP_bac_3
Heteromeric, 304 amino acids: PaperBLAST, CDD