GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for aatP (aspartate/asparagine ABC transporter, ATPase component) in L-asparagine catabolism

Or see other characterized proteins similar to aatP

Or see all steps for L-asparagine catabolism

Or cluster curated proteins matching a keyword

Definition of aatP

Fetched 5 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 5 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by cluster

Escherichia coli

b0652 glutamate/aspartate ABC transporter ATP binding subunit (EC 7.4.2.1) from Escherichia coli K-12 substr. MG1655
TC 3.A.1.3.4 / P0AAG3 Glutamate/aspartate transport ATP-binding protein GltL aka B0652, component of Glutamate/aspartate porter from Escherichia coli
P0AAG3 glutamate/aspartate ABC transporter ATP binding subunit (EC 7.4.2.1) from Escherichia coli (strain K12)
PFams: ABC_tran
Heteromeric, 241 amino acids: PaperBLAST, CDD (Cluster 1)

Pseudomonas fluorescens

PfGW456L13_4773 ABC transporter for L-Asparagine and possibly other L-amino acids, putative ATPase component from Pseudomonas fluorescens GW456-L13
PFams: ABC_tran
Heteromeric, 244 amino acids: PaperBLAST, CDD (Cluster 1)

Pf1N1B4_774 ABC transporter for L-asparagine and L-glutamate, ATPase component from Pseudomonas fluorescens FW300-N1B4
PFams: ABC_tran
Heteromeric, 244 amino acids: PaperBLAST, CDD (Cluster 1)

AO353_16275 ABC transporter for L-aspartate, L-asparagine, L-glutamate, and L-glutamine, ATPase component from Pseudomonas fluorescens FW300-N2E3
PFams: ABC_tran
Heteromeric, 244 amino acids: PaperBLAST, CDD (Cluster 1)

Pseudomonas putida

TC 3.A.1.3.19 / Q88NY5 PP1068, component of Acidic amino acid uptake porter, AatJMQP from Pseudomonas putida (strain KT2440)
PFams: ABC_tran
Heteromeric, 256 amino acids: PaperBLAST, CDD (Cluster 1)