Other Characterized Proteins Similar to aatJ
Finding the characterized proteins for aatJ (aspartate/asparagine ABC transporter, substrate-binding component AatJ) in L-aspartate catabolism
Or see clustering for step aatJ
Or see all steps for L-aspartate catabolism
Or cluster curated proteins matching a keyword
Definition of aatJ
- Curated sequence Q88NY2: PP1071, component of Acidic amino acid uptake porter, AatJMQP
- Curated sequence AO353_16290: ABC transporter for L-aspartate, L-asparagine, L-glutamate, and L-glutamine, periplasmic substrate-binding component
- Curated sequence Pf1N1B4_771: ABC transporter for L-asparagine and L-glutamate, periplasmic substrate-binding component
- Curated sequence PfGW456L13_4770: ABC transporter for L-Asparagine and possibly other L-amino acids, periplasmic substrate-binding component
- Ignore hits to Q9I402 when looking for 'other' hits (Probable binding protein component of ABC transporter, component of Amino acid transporter, AatJMQP. Probably transports L-glutamic acid, D-glutamine acid, L-glutamine and N-acetyl L-glutamic acid (Johnson et al. 2008). Very similar to 3.A.1.3.19 of P. putida)
- Curated sequence CH_002441: glutamate-aspartate periplasmic-binding protein. Glutamate/aspartate import solute-binding protein. YBEJ aka GltI aka B0655, component of Glutamate/aspartate porter. glutamate/aspartate ABC transporter periplasmic binding protein (EC 7.4.2.1). glutamate/aspartate ABC transporter periplasmic binding protein (EC 7.4.2.1)
- Comment: AatJMQP from Pseudomonas putida KT2440, TC 3.A.1.3.19, is quite similar to an aspartate ABC transporter from P. fluorescens N2E3 and to GltIJKL from E. coli. It is also very similar to asparagine/glutamate transporters from other Pseudomonas, which might transport aspartate as well. (aatJ = PP1071 or AO353_16290 or gltI)
Fetched 5 sequences
Running ublast to find other characterized proteins with 40% identity and 70% coverage
Found hits to 1 other characterized sequences. (Found 6 hits including self hits.)
Removing ignored items reduces this to 0 close sequences.
Close but ignored sequences
(Sequences that are similar to these will still be high-confidence candidates for aatJ.)
TC 3.A.1.3.22 / Q9I402 Probable binding protein component of ABC transporter, component of Amino acid transporter, AatJMQP. Probably transports L-glutamic acid, D-glutamine acid, L-glutamine and N-acetyl L-glutamic acid (Johnson et al. 2008). Very similar to 3.A.1.3.19 of P. putida from Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
PFams: SBP_bac_3
Heteromeric, 302 amino acids: PaperBLAST, CDD, TCDB::Q9I402
79% identical to
PfGW456L13_4770 ABC transporter for L-Asparagine and possibly other L-amino acids, periplasmic substrate-binding component from Pseudomonas fluorescens GW456-L13
PFams: SBP_bac_3
Heteromeric, 304 amino acids: PaperBLAST, CDD