GapMind for catabolism of small carbon sources


Other Characterized Proteins Similar to aatQ

Finding the characterized proteins for aatQ (aspartate/asparagine ABC transporter, permease component 1 (AatQ)) in L-aspartate catabolism

Or see clustering for step aatQ

Or see all steps for L-aspartate catabolism

Or cluster curated proteins matching a keyword

Definition of aatQ

Fetched 5 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 1 other characterized sequences. (Found 6 hits including self hits.)

Removing ignored items reduces this to 0 close sequences.

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for aatQ.)

TC 3.A.1.3.22 / Q9I403 Amino acid ABC transporter membrane protein, component of Amino acid transporter, AatJMQP. Probably transports L-glutamic acid, D-glutamine acid, L-glutamine and N-acetyl L-glutamic acid (Johnson et al. 2008). Very similar to 3.A.1.3.19 of P. putida from Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
PFams: BPD_transp_1
Heteromeric, 248 amino acids: PaperBLAST, CDD, TCDB::Q9I403
90% identical to

TC 3.A.1.3.19 / Q88NY3 PP1070, component of Acidic amino acid uptake porter, AatJMQP from Pseudomonas putida (strain KT2440)
PFams: BPD_transp_1
Heteromeric, 248 amino acids: PaperBLAST, CDD