Other Characterized Proteins Similar to TM0029

Finding the characterized proteins for TM0029 (cellobiose ABC transporter, permease component 2) in D-cellobiose catabolism

Or see clustering for step TM0029

Or see all steps for D-cellobiose catabolism

Or cluster curated proteins matching a keyword

Definition of TM0029

• Curated sequence Q9WXN6: TM0029, component of β-glucoside porter (Conners et al., 2005). Binds cellobiose, laminaribiose (Nanavati et al. 2006). Regulated by cellobiose-responsive repressor BglR
• Ignore hits to Q9X0U8 when looking for 'other' hits (TM1221, component of Probable cellobiose porter. Induced by barley, glucomannan)

Fetched 1 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 1 other characterized sequences. (Found 2 hits including self hits.)

Removing ignored items reduces this to 0 close sequences.

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for TM0029.)

TC 3.A.1.5.14 / Q9X0U8 TM1221, component of Probable cellobiose porter. Induced by barley, glucomannan
PFams: BPD_transp_1
Heteromeric, 282 amino acids: PaperBLAST, CDD, TCDB::Q9X0U8
41% identical to

TC 3.A.1.5.16 / Q9WXN6 TM0029, component of β-glucoside porter (Conners et al., 2005). Binds cellobiose, laminaribiose (Nanavati et al. 2006). Regulated by cellobiose-responsive repressor BglR
PFams: OppC_N, BPD_transp_1
Heteromeric, 280 amino acids: PaperBLAST, CDD