GapMind for catabolism of small carbon sources


Other Characterized Proteins Similar to TM0030

Finding the characterized proteins for TM0030 (cellobiose ABC transporter, permease component 1) in D-cellobiose catabolism

Or see clustering for step TM0030

Or see all steps for D-cellobiose catabolism

Or cluster curated proteins matching a keyword

Definition of TM0030

Fetched 1 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 1 other characterized sequences. (Found 2 hits including self hits.)

Removing ignored items reduces this to 0 close sequences.

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for TM0030.)

TC 3.A.1.5.14 / Q9X0U9 TM1222, component of Probable cellobiose porter. Induced by barley, glucomannan
PFams: BPD_transp_1
Heteromeric, 329 amino acids: PaperBLAST, CDD, TCDB::Q9X0U9
43% identical to

TC 3.A.1.5.16 / Q9WXN7 TM0030, component of β-glucoside porter (Conners et al., 2005). Binds cellobiose, laminaribiose (Nanavati et al. 2006). Regulated by cellobiose-responsive repressor BglR
PFams: BPD_transp_1
Heteromeric, 338 amino acids: PaperBLAST, CDD