Finding the characterized proteins for TM0030 (cellobiose ABC transporter, permease component 1) in D-cellobiose catabolism
Or see clustering for step TM0030
Or see all steps for D-cellobiose catabolism
Or cluster curated proteins matching a keyword
Definition of TM0030
Fetched 1 sequences
Running ublast to find other characterized proteins with 40% identity and 70% coverage
Found hits to 1 other characterized sequences. (Found 2 hits including self hits.)
Removing ignored items reduces this to 0 close sequences.
(Sequences that are similar to these will still be high-confidence candidates for TM0030.)
TC 3.A.1.5.14 / Q9X0U9 TM1222, component of Probable cellobiose porter. Induced by barley, glucomannan
PFams: BPD_transp_1
Heteromeric, 329 amino acids: PaperBLAST, CDD, TCDB::Q9X0U9
43% identical to
TC 3.A.1.5.16 / Q9WXN7 TM0030, component of β-glucoside porter (Conners et al., 2005). Binds cellobiose, laminaribiose (Nanavati et al. 2006). Regulated by cellobiose-responsive repressor BglR
PFams: BPD_transp_1
Heteromeric, 338 amino acids: PaperBLAST, CDD