GapMind for catabolism of small carbon sources

 

Other Characterized Proteins Similar to aglE'

Finding the characterized proteins for aglE' (glucose ABC transporter, substrate-binding component (AglE)) in D-cellobiose catabolism

Or see clustering for step aglE'

Or see all steps for D-cellobiose catabolism

Or cluster curated proteins matching a keyword

Definition of aglE'

Fetched 1 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 2 other characterized sequences. (Found 2 hits including self hits.)

Removing ignored items reduces this to 1 close sequences.

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for aglE'.)

TC 3.A.1.1.32 / Q55471 Slr0529 protein, component of The glucosylglycerol uptake transporter (functions in osmoprotection and also transports sucrose and trehalose (Mikkat and Hagemann, 2000) (most similar to 3.A.1.1.8) from Synechocystis sp. (strain PCC 6803)
PFams: SBP_bac_1, SBP_bac_8
Heteromeric, 421 amino acids: PaperBLAST, CDD, TCDB::Q55471
40% identical to

A8LLL6 Putative bacterial solute-binding protein 1 family
452 amino acids: PaperBLAST, CDD

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for aglE'.)

TC 3.A.1.1.8 / Q9Z3R5 AglE aka R00695 aka SMC03061, component of Sucrose/maltose/trehalose porter (sucrose-inducible) from Rhizobium meliloti (Sinorhizobium meliloti)
SMc03061 ABC transporter for D-Maltose and D-Trehalose, ATPase component from Sinorhizobium meliloti 1021
PFams: SBP_bac_1
Heteromeric, 458 amino acids: PaperBLAST, CDD, TCDB::Q9Z3R5
59% identical to

A8LLL6 Putative bacterial solute-binding protein 1 family
452 amino acids: PaperBLAST, CDD