GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for cdt (cellobiose transporter cdt-1/cdt-2) in D-cellobiose catabolism

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Definition of cdt

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 0 of these sequences

Found 0 clusters of similar sequences. Another 2 sequences are not clustered. Download as table or as draft rules or view by organism

Singletons (0/2 heteromeric)

TC 2.A.1.1.82 / Q7SCU1 The cellobiose/cellodextrin transporter, Cdt-1 from Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
PFams: Sugar_tr, MFS_1
579 amino acids: PaperBLAST, CDD

TC 2.A.1.1.83 / Q7SD12 The cellobiose/cellodextrin transporter, Cdt-2. It functions by facilitated diffusion and functions with low efficiency, but mutations can increase its activity very substantially (Lian et al. 2014). It appears to be capable of catalyzing efflux of 2'-fucosyllactose (2'FL), the most abundant oligosaccharide in human breast milk, following genetic engineering from Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
PFams: Sugar_tr, MFS_1, TRI12
525 amino acids: PaperBLAST, CDD