Finding the characterized proteins for acn (aconitase) in citrate catabolism
Or see clustering for step acn
Or see all steps for citrate catabolism
Or cluster curated proteins matching a keyword
Definition of acn
Fetched 52 sequences
Running ublast to find other characterized proteins with 40% identity and 70% coverage
Found hits to 9 other characterized sequences. (Found 61 hits including self hits.)
Removing ignored items reduces this to 5 close sequences.
There are also 4 HMM-only high-coverage hits.
(Sequences that are similar to these will not be high-confidence candidates for acn.)
PRPD1_CORGL / Q8NSH9 2-methylcitrate dehydratase 1; 2-MC dehydratase; EC 4.2.1.79 from Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
PFams: MmgE_PrpD
498 amino acids: PaperBLAST, CDD, SwissProt::Q8NSH9
73% identical to
PRPD2_CORGL / Q8NSL3 2-methylcitrate dehydratase 2; 2-MC dehydratase; Aconitate hydratase; ACN; Aconitase; EC 4.2.1.79; EC 4.2.1.3 from Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
PFams: MmgE_PrpD
504 amino acids: PaperBLAST, CDD
PRPD_YARLI / Q6C354 2-methylcitrate dehydratase, mitochondrial; EC 4.2.1.79 from Yarrowia lipolytica (strain CLIB 122 / E 150) (Yeast) (Candida lipolytica)
PFams: MmgE_PrpD
520 amino acids: PaperBLAST, CDD, SwissProt::Q6C354
64% identical to
PRPD_CUPNE / Q937N6 2-methylcitrate dehydratase; 2-MC dehydratase; Aconitate hydratase; ACN; Aconitase; EC 4.2.1.79; EC 4.2.1.3 from Cupriavidus necator (Alcaligenes eutrophus) (Ralstonia eutropha)
PFams: MmgE_PrpD
484 amino acids: PaperBLAST, CDD
MMGE_BACSU / P45859 Citrate/2-methylcitrate dehydratase; EC 4.2.1.- from Bacillus subtilis (strain 168)
P45859 2-methylcitrate dehydratase (EC 4.2.1.79) from Bacillus subtilis
PFams: MmgE_PrpD
472 amino acids: PaperBLAST, CDD, SwissProt::P45859
61% identical to
b0334 2-methylcitrate dehydratase (EC 4.2.1.79) from Escherichia coli K-12 substr. MG1655
P77243 2-methylcitrate dehydratase (EC 4.2.1.79) from Escherichia coli (strain K12)
PRPD_ECOLI / P77243 2-methylcitrate dehydratase; 2-MC dehydratase; (2S,3S)-2-methylcitrate dehydratase; Aconitate hydratase; ACN; Aconitase; EC 4.2.1.79; EC 4.2.1.3 from Escherichia coli (strain K12)
P77243 2-methylcitrate dehydratase (EC 4.2.1.79) from Escherichia coli
PDB|1SZQ 2-methylcitrate dehydratase; EC 4.2.1.79 from Escherichia coli K12
PFams: MmgE_PrpD
483 amino acids: PaperBLAST, CDD
PRPD_YEAST / Q12428 Probable 2-methylcitrate dehydratase; 2-MC dehydratase; (2S,3S)-2-methylcitrate dehydratase; EC 4.2.1.79 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
PFams: MmgE_PrpD
516 amino acids: PaperBLAST, CDD, SwissProt::Q12428
60% identical to
PRPD_CUPNE / Q937N6 2-methylcitrate dehydratase; 2-MC dehydratase; Aconitate hydratase; ACN; Aconitase; EC 4.2.1.79; EC 4.2.1.3 from Cupriavidus necator (Alcaligenes eutrophus) (Ralstonia eutropha)
PFams: MmgE_PrpD
484 amino acids: PaperBLAST, CDD
Ac3H11_1140 2-methylisocitrate dehydratase (EC 4.2.1.99) from Acidovorax sp. GW101-3H11
PFams: Aconitase, Aconitase_C
980 amino acids: PaperBLAST, CDD, reanno::acidovorax_3H11:Ac3H11_1140
51% identical to
HP15_3433 Aconitate hydratase (EC 4.2.1.3) from Marinobacter adhaerens HP15
PFams: Aconitase, Aconitase_C
919 amino acids: PaperBLAST, CDD
(Since these sequences' annotations are outside the definition for acn, HMM hits that are over 40% similar to these sequences will be scored as moderate confidence.)
IREB2_MOUSE / Q811J3 Iron-responsive element-binding protein 2; IRE-BP 2; Iron regulatory protein 2; IRP2 from Mus musculus (Mouse)
PFams: Aconitase, Aconitase, Aconitase_C
963 amino acids: PaperBLAST, CDD
Q4JFF1 phosphinomethylmalate isomerase (EC 4.2.1.166) from Streptomyces viridochromogenes
PFams: Aconitase, Aconitase_C
889 amino acids: PaperBLAST, CDD
A0A0M3N196 phosphinomethylmalate isomerase (EC 4.2.1.166) from Kitasatospora phosalacinea
PFams: Aconitase, Aconitase_C
882 amino acids: PaperBLAST, CDD
IREB2_HUMAN / P48200 Iron-responsive element-binding protein 2; IRE-BP 2; Iron regulatory protein 2; IRP2 from Homo sapiens (Human)
PFams: Aconitase, Aconitase, Aconitase_C
963 amino acids: PaperBLAST, CDD
(Sequences that are similar to these will still be high-confidence candidates for acn.)
O74699 aconitase from Aspergillus terreus
PFams: Aconitase, Aconitase_C
778 amino acids: PaperBLAST, CDD, metacyc::MONOMER-13634
93% identical to
ACON_ASPFU / Q4WLN1 Aconitate hydratase, mitochondrial; Aconitase; Citrate hydro-lyase; Homocitrate dehydratase; EC 4.2.1.3; EC 4.2.1.- from Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (Aspergillus fumigatus)
PFams: Aconitase, Aconitase_C
787 amino acids: PaperBLAST, CDD
ACON2_YEAST / P39533 Homocitrate dehydratase, mitochondrial; Aconitase 2; EC 4.2.1.- from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
PFams: Aconitase, Aconitase_C
789 amino acids: PaperBLAST, CDD, SwissProt::P39533
55% identical to
ACON_YEAST / P19414 Aconitate hydratase, mitochondrial; Aconitase; Citrate hydro-lyase; EC 4.2.1.3 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
P19414 aconitate hydratase (EC 4.2.1.3) from Saccharomyces cerevisiae
PFams: Aconitase, Aconitase_C
778 amino acids: PaperBLAST, CDD
ACON2_ASPFU / Q4WJ90 Putative aconitate hydratase, mitochondrial; Aconitase 2; EC 4.2.1.- from Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (Aspergillus fumigatus)
PFams: Aconitase, Aconitase_C
799 amino acids: PaperBLAST, CDD, SwissProt::Q4WJ90
63% identical to
ACON2_SCHPO / Q9P7D4 Homocitrate dehydratase, mitochondrial; Aconitase 2; EC 4.2.1.- from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Q9P7D4 aconitate hydratase (EC 4.2.1.3) from Schizosaccharomyces pombe
PFams: Aconitase, Aconitase_C, Ribosomal_L21p
918 amino acids: PaperBLAST, CDD
ACON2_EMENI / Q5B6D6 Putative aconitate hydratase, mitochondrial; Aconitase 2; EC 4.2.1.- from Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (Aspergillus nidulans)
PFams: Aconitase, Aconitase_C
796 amino acids: PaperBLAST, CDD, SwissProt::Q5B6D6
54% identical to
Q8RP87 aconitate hydratase (EC 4.2.1.3) from Bacteroides fragilis
PFams: Aconitase, Aconitase_C
747 amino acids: PaperBLAST, CDD