Other Characterized Proteins Similar to astC

GapMind for catabolism of small carbon sources

Other Characterized Proteins Similar to astC

Finding the characterized proteins for astC (succinylornithine transaminase) in L-citrulline catabolism

Or see clustering for step astC

Or see all steps for L-citrulline catabolism

Or cluster curated proteins matching a keyword

Definition of astC

Curated proteins or TIGRFams with EC 2.6.1.81
Curated sequence GFF3099: acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
Comment: Marinobacter adhaerens HP15_3042 (GFF3099) is important for arginine biosynthesis as well as catabolism, suggesting it is succinylornithine transaminase and acetylornithine transaminase (similar to P. aeruginosa aruC)

Fetched 10 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 6 other characterized sequences. (Found 16 hits including self hits.)

There are also 2 HMM-only high-coverage hits.

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for astC.)

A8J933 acetylornithine transaminase (EC 2.6.1.11) from Chlamydomonas reinhardtii
PFams: Aminotran_3
460 amino acids: PaperBLAST, CDD, BRENDA::A8J933
44% identical to

ASTC_SALTY / Q8ZPV2 Succinylornithine transaminase; SOAT; Succinylornithine aminotransferase; EC 2.6.1.81 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
PFams: Aminotran_3, Aminotran_1_2
408 amino acids: PaperBLAST, CDD

ARGD_ARATH / Q9M8M7 Acetylornithine aminotransferase, chloroplastic/mitochondrial; ACOAT; Acetylornithine transaminase; AOTA; Protein HOPW1-1-INTERACTING 1; EC 2.6.1.11 from Arabidopsis thaliana (Mouse-ear cress)
PFams: Aminotran_3
457 amino acids: PaperBLAST, CDD, SwissProt::Q9M8M7
43% identical to

PS417_21710 Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas simiae WCS417
PFams: Aminotran_3, Aminotran_1_2
406 amino acids: PaperBLAST, CDD

AZOBR_RS19025 acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] from Azospirillum brasilense Sp245
PFams: Aminotran_3
389 amino acids: PaperBLAST, CDD, reanno::azobra:AZOBR_RS19025
44% identical to

PS417_21710 Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas simiae WCS417
PFams: Aminotran_3, Aminotran_1_2
406 amino acids: PaperBLAST, CDD

Q93R93 L-2-aminoadipate semialdehyde transaminase monomer from Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
LYSJ_THET2 / Q93R93 [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.- from Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
PFams: Aminotran_3
395 amino acids: PaperBLAST, CDD, SwissProt::Q93R93
41% identical to

ARGD_SALTY / P40732 Acetylornithine/succinyldiaminopimelate aminotransferase; ACOAT; DapATase; Succinyldiaminopimelate transferase; EC 2.6.1.11; EC 2.6.1.17 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
PFams: Aminotran_3, Aminotran_1_2
405 amino acids: PaperBLAST, CDD

RF|NP_588255.1 acetylornithine aminotransferase; EC 2.6.1.11 from Schizosaccharomyces pombe
PFams: Aminotran_3
441 amino acids: PaperBLAST, CDD, CharProtDB::CH_124889
42% identical to

ARGD_YEAST / P18544 Acetylornithine aminotransferase, mitochondrial; ACOAT; EC 2.6.1.11 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
PFams: Aminotran_3
423 amino acids: PaperBLAST, CDD, SwissProt::P18544
40% identical to

PS417_21710 Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas simiae WCS417
PFams: Aminotran_3, Aminotran_1_2
406 amino acids: PaperBLAST, CDD

HMM-only sequences

(Since these sequences' annotations are outside the definition for astC, HMM hits that are over 40% similar to these sequences will be scored as moderate confidence.)

b3359 N-acetylornithine aminotransferase / N-succinyldiaminopimelate aminotransferase (EC 2.6.1.11; EC 2.6.1.17) from Escherichia coli K-12 substr. MG1655
P18335 N-acetylornithine aminotransferase / N-succinyldiaminopimelate aminotransferase (EC 2.6.1.11; EC 2.6.1.17) from Escherichia coli (strain K12)
ARGD_ECOLI / P18335 Acetylornithine/succinyldiaminopimelate aminotransferase; ACOAT; DapATase; Succinyldiaminopimelate transferase; EC 2.6.1.11; EC 2.6.1.17 from Escherichia coli (strain K12)
PFams: Aminotran_3, Aminotran_1_2
406 amino acids: PaperBLAST, CDD