GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for citrullinase (putative citrullinase) in L-citrulline catabolism

Or see other characterized proteins similar to citrullinase

Or see all steps for L-citrulline catabolism

Or cluster curated proteins matching a keyword

Definition of citrullinase

Fetched 4 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 308-311 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

PGA1_c16380 arginine deiminase (EC from Phaeobacter inhibens BS107
PFams: Amidinotransf
309 amino acids: PaperBLAST, CDD, Compare to cluster

PS417_17580 arginine deiminase (EC from Pseudomonas simiae WCS417
PFams: Amidinotransf
308 amino acids: PaperBLAST, CDD, Compare to cluster

AO353_25635 arginine deiminase (EC from Pseudomonas fluorescens FW300-N2E3
PFams: Amidinotransf
311 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/1 heteromeric)

Q5NHL7_FRATT Carbon-nitrogen hydrolase family protein; EC=3.5.-.-
286 amino acids: PaperBLAST, CDD