GapMind for catabolism of small carbon sources


Other Characterized Proteins Similar to nupC'

Finding the characterized proteins for nupC' (deoxyinosine ABC transporter, permease component 2) in 2'-deoxyinosine catabolism

Or see clustering for step nupC'

Or see all steps for 2'-deoxyinosine catabolism

Or cluster curated proteins matching a keyword

Definition of nupC'

Fetched 2 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 1 other characterized sequences. (Found 3 hits including self hits.)

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for nupC'.)

TC 3.A.1.2.18 / Q9WXW0 ABC-type transporter, integral membrane subunit, component of Xylose porter (Nanavati et al. 2006). Regulated by xylose-responsive regulator XylR from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
PFams: BPD_transp_2
Heteromeric, 319 amino acids: PaperBLAST, CDD, TCDB::Q9WXW0
42% identical to

TC 3.A.1.2.17 / A2RKA5 Purine/cytidine ABC transporter permease protein, component of General nucleoside uptake porter, NupABC/BmpA (transports all common nucleosides as well as 5-fluorocytidine, inosine, deoxyuridine and xanthosine) (Martinussen et al., 2010) (Most similar to 3.A.1.2.12). NupA is 506aas with two ABC (C) domains. NupB has 8 predicted TMSs, NupC has 9 or 10 predicted TMSs in a 4 + 1 (or 2) + 4 arrangement from Lactococcus lactis subsp. cremoris (strain MG1363)
PFams: BPD_transp_2
Heteromeric, 317 amino acids: PaperBLAST, CDD