GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for nupG (deoxyinosine permease NupG/XapB) in 2'-deoxyinosine catabolism

Or see other characterized proteins similar to nupG

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Definition of nupG

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 418-418 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

b2964 nucleoside:H+ symporter NupG from Escherichia coli K-12 substr. MG1655
NUPG_ECOLI / P0AFF4 Nucleoside permease NupG; Nucleoside-transport system protein NupG from Escherichia coli (strain K12)
TC 2.A.1.10.1 / P0AFF4 Nucleoside porter, NupG from Escherichia coli
P0AFF4 nucleoside:H+ symporter NupG from Escherichia coli (strain K12)
CH_088596 nucleoside permease nupG from Escherichia coli K12
PFams: Nuc_H_symport, MFS_1_like
418 amino acids: PaperBLAST, CDD, Compare to cluster

b2406 xanthosine:H+ symporter XapB from Escherichia coli K-12 substr. MG1655
XAPB_ECOLI / P45562 Xanthosine permease; Xanthosine transporter from Escherichia coli (strain K12)
TC 2.A.1.10.2 / P45562 Xanthosine porter, XapB from Escherichia coli (strain K12)
P45562 xanthosine:H+ symporter XapB from Escherichia coli (strain K12)
PFams: Nuc_H_symport, MFS_1_like, LacY_symp, MFS_1
418 amino acids: PaperBLAST, CDD, Compare to cluster