GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for deoxyribonate-dehyd (2-deoxy-D-ribonate 3-dehydrogenase) in 2-deoxy-D-ribonate catabolism

Or see other characterized proteins similar to deoxyribonate-dehyd

Or see all steps for 2-deoxy-D-ribonate catabolism

Or cluster curated proteins matching a keyword

Definition of deoxyribonate-dehyd

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by cluster

Burkholderia phytofirmans

BPHYT_RS04775 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans PsJN
PFams: KR, adh_short, adh_short_C2, DUF1776
263 amino acids: PaperBLAST, CDD (Cluster 1)

Paraburkholderia bryophila

H281DRAFT_00644 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila 376MFSha3.1
PFams: adh_short, KR, adh_short_C2, DUF1776
263 amino acids: PaperBLAST, CDD (Cluster 1)

Pseudomonas simiae

A0A1N7UEI0 2-deoxy-D-ribonate dehydrogenase from Pseudomonas simiae
PS417_07245 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae WCS417
PFams: Epimerase, KR, adh_short, adh_short_C2
262 amino acids: PaperBLAST, CDD (Cluster 1)