GapMind for catabolism of small carbon sources

 

Other Characterized Proteins Similar to drdehyd-beta

Finding the characterized proteins for drdehyd-beta (2-deoxy-D-ribose dehydrogenase, beta subunit) in 2-deoxy-D-ribose catabolism

Or see clustering for step drdehyd-beta

Or see all steps for 2-deoxy-D-ribose catabolism

Or cluster curated proteins matching a keyword

Definition of drdehyd-beta

Fetched 1 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 1 other characterized sequences. (Found 2 hits including self hits.)

Removing ignored items reduces this to 0 close sequences.

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for drdehyd-beta.)

PP_3622 vanillin dehydrogenase, iorB-like component from Pseudomonas putida KT2440
PFams: Ald_Xan_dh_C2, Ald_Xan_dh_C2, Ald_Xan_dh_C2
Heteromeric, 751 amino acids: PaperBLAST, CDD, reanno::Putida:PP_3622
85% identical to

A0A1N7UDX6 2-deoxy-D-ribose dehydrogenase β subunit from Pseudomonas simiae
PS417_10885 Deoxyribose 1-dehydrogenase, beta subunit from Pseudomonas simiae WCS417
PFams: Ald_Xan_dh_C2, Ald_Xan_dh_C2, Ald_Xan_dh_C2
Heteromeric, 739 amino acids: PaperBLAST, CDD