GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for adhAqn (ethanol dehydrogenase (quinone), subunit I) in ethanol catabolism

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Definition of adhAqn

Fetched 5 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 5 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by cluster

Acetobacter aceti

P18278 alcohol dehydrogenase (quinone) (EC 1.1.5.5) from Acetobacter aceti
PFams: PQQ, PQQ_2, PQQ, PQQ, PQQ_2, PQQ_3, Cytochrome_CBB3
742 amino acids: PaperBLAST, CDD (Cluster 1)

Gluconacetobacter polyoxogenes

ADHA_GLUPO / P28036 Alcohol dehydrogenase (quinone), dehydrogenase subunit; ADH; Alcohol dehydrogenase (quinone), acceptor subunit; Alcohol dehydrogenase (quinone), subunit I; Ethanol:Q2 reductase; G3-ADH subunit I; Quinohemoprotein alcohol dehydrogenase; Quinohemoprotein-cytochrome c complex; Ubiquinol oxidase; EC 1.1.5.5 from Gluconacetobacter polyoxogenes (Acetobacter polyoxogenes)
PFams: PQQ_2, PQQ, PQQ_3, PQQ, PQQ_2, PQQ_3, Cytochrome_CBB3
738 amino acids: PaperBLAST, CDD (Cluster 1)

Gluconobacter oxydans

ADHA_GLUOX / O05542 Alcohol dehydrogenase (quinone), dehydrogenase subunit; ADH; Alcohol dehydrogenase (quinone), acceptor subunit; Alcohol dehydrogenase (quinone), subunit I; Ethanol:Q2 reductase; G3-ADH subunit I; Quinohemoprotein alcohol dehydrogenase; Quinohemoprotein-cytochrome c complex; Ubiquinol oxidase; EC 1.1.5.5 from Gluconobacter oxydans (strain 621H) (Gluconobacter suboxydans)
O05542 alcohol dehydrogenase acceptor subunit (EC 1.1.5.5) from Gluconobacter oxydans (strain 621H)
PFams: PQQ_2, PQQ, PQQ_3, PQQ, PQQ, Cytochrome_CBB3
Heteromeric, 757 amino acids: PaperBLAST, CDD (Cluster 1)

Komagataeibacter europaeus

Q44002 alcohol dehydrogenase (quinone) (EC 1.1.5.5) from Komagataeibacter europaeus
PFams: PQQ_2, PQQ, PQQ_3, PQQ, PQQ_2, PQQ_3, Cytochrome_CBB3
739 amino acids: PaperBLAST, CDD (Cluster 1)

Pseudogluconobacter saccharoketogenes

Q93RE9 alcohol dehydrogenase (quinone) (EC 1.1.5.5) from Pseudogluconobacter saccharoketogenes
PFams: PQQ_2, PQQ_3, PQQ, PQQ_2, PQQ_3, PQQ
608 amino acids: PaperBLAST, CDD (Cluster 1)