Other Characterized Proteins Similar to adhBqn

GapMind for catabolism of small carbon sources

Other Characterized Proteins Similar to adhBqn

Finding the characterized proteins for adhBqn (ethanol dehydrogenase (quinone), subunit II) in ethanol catabolism

Or see clustering for step adhBqn

Or see all steps for ethanol catabolism

Or cluster curated proteins matching a keyword

Definition of adhBqn

Curated sequence P0A388: Alcohol dehydrogenase (quinone), cytochrome c subunit; ADH; Alcohol dehydrogenase (quinone), subunit II; Cytochrome c-553; Cytochrome c553; Ethanol:Q2 reductase; G3-ADH subunit II; Quinohemoprotein-cytochrome c complex; Ubiquinol oxidase; EC 1.1.5.5
Curated sequence Q47945: Alcohol dehydrogenase (quinone), cytochrome c subunit; ADH; Alcohol dehydrogenase (quinone), subunit II; Cytochrome c-553; Cytochrome c553; Ethanol:Q2 reductase; G3-ADH subunit II; Quinohemoprotein-cytochrome c complex; Ubiquinol oxidase; EC 1.1.5.5. alcohol dehydrogenase cytochrome c subunit (EC 1.1.5.5)
Ignore hits to items matching 1.1.2.8 when looking for 'other' hits

Fetched 2 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 8 other characterized sequences. (Found 10 hits including self hits.)

Removing ignored items reduces this to 5 close sequences.

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for adhBqn.)

Q4KKM6 D-gluconate dehydrogenase cytochrome c subunit (EC 1.1.99.3) from Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
PFams: Cytochrom_C, Cytochrome_CBB3, Cytochrom_C
Heteromeric, 434 amino acids: PaperBLAST, CDD, metacyc::MONOMER-12746
58% identical to

ADHB_GLUPO / P0A388 Alcohol dehydrogenase (quinone), cytochrome c subunit; ADH; Alcohol dehydrogenase (quinone), subunit II; Cytochrome c-553; Cytochrome c553; Ethanol:Q2 reductase; G3-ADH subunit II; Quinohemoprotein-cytochrome c complex; Ubiquinol oxidase; EC 1.1.5.5 from Gluconacetobacter polyoxogenes (Acetobacter polyoxogenes)
PFams: Cytochrom_C, Cytochrome_CBB3, Cytochrom_C
468 amino acids: PaperBLAST, CDD

O34215 gluconate 2-dehydrogenase cytochrome c subunit (EC 1.1.99.3) from Pantoea cypripedii
GADH2_PANCY / O34215 Gluconate 2-dehydrogenase cytochrome c subunit; GA 2-DH cytochrome c subunit; GADH cytochrome c subunit; EC 1.1.99.3 from Pantoea cypripedii (Pectobacterium cypripedii) (Erwinia cypripedii)
PFams: Cytochrome_CBB3, Cytochrom_C, Cytochrome_CBB3, Cytochrom_C
Heteromeric, 441 amino acids: PaperBLAST, CDD, SwissProt::O34215
56% identical to

Q5FRK5 gluconate 2-dehydrogenase (EC 1.1.1.215) from Gluconobacter oxydans
PFams: Cytochrom_C, Cytochrom_C, Cytochrome_CBB3
437 amino acids: PaperBLAST, CDD, BRENDA::Q5FRK5
52% identical to

PP_3623 vanillin dehydrogenase, cytochrome c component from Pseudomonas putida KT2440
PFams: Cytochrom_C, Cytochrom_C, Cytochrome_CBB3, Cytochrom_C
Heteromeric, 447 amino acids: PaperBLAST, CDD, reanno::Putida:PP_3623
50% identical to

PS417_10880 cytochrome c component of deoxyribose dehydrogenase from Pseudomonas simiae WCS417
PFams: Cytochrom_C, Cytochrome_CBB3, Cytochrom_C
Heteromeric, 447 amino acids: PaperBLAST, CDD, reanno::WCS417:GFF2133
48% identical to

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for adhBqn.)

D2SZY5 alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus
PFams: Cytochrom_C, Cytochrom_C, Cytochrome_CBB3
472 amino acids: PaperBLAST, CDD, BRENDA::D2SZY5
72% identical to

C7G3B8 alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus
PFams: Cytochrom_C, Cytochrom_C, Cytochrome_CBB3
472 amino acids: PaperBLAST, CDD, BRENDA::C7G3B8
72% identical to

C9K502 alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus
PFams: Cytochrom_C, Cytochrom_C, Cytochrome_CBB3
472 amino acids: PaperBLAST, CDD, BRENDA::C9K502
72% identical to