GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for adhBqn (ethanol dehydrogenase (quinone), subunit II) in ethanol catabolism

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Definition of adhBqn

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by cluster

Gluconacetobacter polyoxogenes

ADHB_GLUPO / P0A388 Alcohol dehydrogenase (quinone), cytochrome c subunit; ADH; Alcohol dehydrogenase (quinone), subunit II; Cytochrome c-553; Cytochrome c553; Ethanol:Q2 reductase; G3-ADH subunit II; Quinohemoprotein-cytochrome c complex; Ubiquinol oxidase; EC 1.1.5.5 from Gluconacetobacter polyoxogenes (Acetobacter polyoxogenes)
PFams: Cytochrom_C, Cytochrome_CBB3, Cytochrom_C
468 amino acids: PaperBLAST, CDD (Cluster 1)

Gluconobacter oxydans

ADHB_GLUOX / Q47945 Alcohol dehydrogenase (quinone), cytochrome c subunit; ADH; Alcohol dehydrogenase (quinone), subunit II; Cytochrome c-553; Cytochrome c553; Ethanol:Q2 reductase; G3-ADH subunit II; Quinohemoprotein-cytochrome c complex; Ubiquinol oxidase; EC 1.1.5.5 from Gluconobacter oxydans (strain 621H) (Gluconobacter suboxydans)
Q47945 alcohol dehydrogenase cytochrome c subunit (EC 1.1.5.5) from Gluconobacter oxydans (strain 621H)
PFams: Cytochrom_C, Cytochrome_CBB3, Cytochrom_C
Heteromeric, 478 amino acids: PaperBLAST, CDD (Cluster 1)