GapMind for catabolism of small carbon sources

 

Other Characterized Proteins Similar to frcC

Finding the characterized proteins for frcC (fructose ABC transporter, permease component FrcC) in D-fructose catabolism

Or see clustering for step frcC

Or see all steps for D-fructose catabolism

Or cluster curated proteins matching a keyword

Definition of frcC

Fetched 2 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 9 other characterized sequences. (Found 10 hits including self hits.)

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for frcC.)

TC 3.A.1.2.21 / B8H230 Inositol ABC transport system, permease protein IatP, component of The myoinositol (high affinity)/ D-ribose (low affinity) transporter IatP/IatA/IbpA. The structure of IbpA with myoinositol bound has been solved from Caulobacter crescentus (strain NA1000 / CB15N)
PFams: BPD_transp_2
Heteromeric, 332 amino acids: PaperBLAST, CDD, TCDB::B8H230
43% identical to

A0A0C4Y7K0 Ribose ABC transport system, permease protein RbsC
337 amino acids: PaperBLAST, CDD

b3750 ribose ABC transporter membrane subunit from Escherichia coli K-12 substr. MG1655
RBSC_ECOLI / P0AGI1 Ribose import permease protein RbsC from Escherichia coli (strain K12)
TC 3.A.1.2.1 / P0AGI1 Ribose transport system permease protein RbsC aka B3750, component of Ribose porter from Escherichia coli
P0AGI1 ribose ABC transporter membrane subunit from Escherichia coli (strain K12)
PFams: BPD_transp_2
Heteromeric, 321 amino acids: PaperBLAST, CDD, SwissProt::P0AGI1
45% identical to

A0A0C4Y7K0 Ribose ABC transport system, permease protein RbsC
337 amino acids: PaperBLAST, CDD

TC 3.A.1.2.11 / Q92WK1 EryF aka RB0338, component of The erythritol permease, EryEFG (Geddes et al., 2010) (probably orthologous to 3.A.1.2.16) from Rhizobium meliloti (Sinorhizobium meliloti)
PFams: BPD_transp_2
Heteromeric, 354 amino acids: PaperBLAST, CDD, TCDB::Q92WK1
41% identical to

A0A0C4Y7K0 Ribose ABC transport system, permease protein RbsC
337 amino acids: PaperBLAST, CDD

AO353_21390 m-Inositol ABC transporter, permease component (iatP) from Pseudomonas fluorescens FW300-N2E3
PFams: BPD_transp_2
Heteromeric, 340 amino acids: PaperBLAST, CDD, reanno::pseudo3_N2E3:AO353_21390
42% identical to

A0A0C4Y7K0 Ribose ABC transport system, permease protein RbsC
337 amino acids: PaperBLAST, CDD

TC 3.A.1.2.19 / Q9X050 ABC-type transporter, integral membrane subunit, component of D-ribose porter (Nanavati et al., 2006). Induced by ribose from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
PFams: BPD_transp_2
Heteromeric, 331 amino acids: PaperBLAST, CDD, TCDB::Q9X050
43% identical to

A0A0C4Y7K0 Ribose ABC transport system, permease protein RbsC
337 amino acids: PaperBLAST, CDD

TC 3.A.1.2.13 / A6VKS9 RbsC, component of The probable autoinducer-2 (AI-2;, a furanosyl borate diester: 3aS,6S,6aR)-2,2,6,6a-tetrahydroxy-3a-methyltetrahydrofuro[3,2-d][1,3,2]dioxaborolan-2-uide) uptake porter (Shao et al., 2007) (50-70% identical to RbsABC of E. coli; TC# 3.A.1.2.1) from Actinobacillus succinogenes (strain ATCC 55618 / 130Z)
PFams: BPD_transp_2
Heteromeric, 322 amino acids: PaperBLAST, CDD, TCDB::A6VKS9
43% identical to

A0A0C4Y7K0 Ribose ABC transport system, permease protein RbsC
337 amino acids: PaperBLAST, CDD

PS417_11895 Inositol transport system permease protein from Pseudomonas simiae WCS417
PFams: BPD_transp_2
340 amino acids: PaperBLAST, CDD, reanno::WCS417:GFF2333
42% identical to

A0A0C4Y7K0 Ribose ABC transport system, permease protein RbsC
337 amino acids: PaperBLAST, CDD

TC 3.A.1.2.18 / Q9WXW7 ABC-type transporter, integral membrane subunit, component of Xylose porter (Nanavati et al. 2006). Regulated by xylose-responsive regulator XylR from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
PFams: BPD_transp_2
Heteromeric, 317 amino acids: PaperBLAST, CDD, TCDB::Q9WXW7
41% identical to

A0A0C4Y7K0 Ribose ABC transport system, permease protein RbsC
337 amino acids: PaperBLAST, CDD

TC 3.A.1.2.20 / G4FGN4 Putative beta-xyloside ABC transporter, permease component, component of Glucose porter. Also bind xylose (Boucher and Noll 2011). Induced by glucose (Frock et al. 2012). Directly regulated by glucose-responsive regulator GluR from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
PFams: BPD_transp_2
Heteromeric, 313 amino acids: PaperBLAST, CDD, TCDB::G4FGN4
41% identical to

A0A0C4Y7K0 Ribose ABC transport system, permease protein RbsC
337 amino acids: PaperBLAST, CDD