GapMind for catabolism of small carbon sources

 

Other Characterized Proteins Similar to tpi

Finding the characterized proteins for tpi (triose-phosphate isomerase) in D-fructose catabolism

Or see clustering for step tpi

Or see all steps for D-fructose catabolism

Or cluster curated proteins matching a keyword

Definition of tpi

Fetched 55 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 4 other characterized sequences. (Found 59 hits including self hits.)

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for tpi.)

G0XRK4 tetrahydroberberine oxidase (EC 1.3.3.8) from Corydalis saxicola
G0XRK4 (S)-canadine oxidase (EC 1.3.3.8) from Corydalis saxicola
PFams: TIM
232 amino acids: PaperBLAST, CDD, metacyc::MONOMER-16686
84% identical to

TPIS_ARATH / P48491 Triosephosphate isomerase, cytosolic; TIM; Triose-phosphate isomerase; EC 5.3.1.1 from Arabidopsis thaliana (Mouse-ear cress)
P48491 triose-phosphate isomerase (EC 5.3.1.1) from Arabidopsis thaliana
PFams: TIM
254 amino acids: PaperBLAST, CDD

ERYH_BRUA2 / Q2YIQ6 L-erythrulose-1-phosphate isomerase; D-3-tetrulose-4-phosphate isomerase; EC 5.3.1.33 from Brucella abortus (strain 2308)
Q2YIQ6 L-erythrulose 1-phosphate isomerase (EC 5.3.1.33) from Brucella abortus
Q2YIQ6 L-erythrulose 1-phosphate isomerase (EC 5.3.1.33) from Brucella abortus (strain 2308)
PFams: TIM
256 amino acids: PaperBLAST, CDD, BRENDA::Q2YIQ6
46% identical to

Q7X216 triose-phosphate isomerase (EC 5.3.1.1) from Klebsiella pneumoniae
PFams: TIM
265 amino acids: PaperBLAST, CDD

LERI_AGRRK / B9JN20 L-erythrulose-1-phosphate isomerase; EC 5.3.1.33 from Agrobacterium radiobacter (strain K84 / ATCC BAA-868)
B9JN20 L-erythrulose-1-phosphate isomerase (EC 5.3.1.33) from Agrobacterium radiobacter (strain K84 / ATCC BAA-868)
PFams: TIM
261 amino acids: PaperBLAST, CDD, SwissProt::B9JN20
47% identical to

Q7X216 triose-phosphate isomerase (EC 5.3.1.1) from Klebsiella pneumoniae
PFams: TIM
265 amino acids: PaperBLAST, CDD

LERI_MYCS2 / A0R756 L-erythrulose-1-phosphate isomerase; EC 5.3.1.33 from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis)
A0R756 L-erythrulose 1-phosphate isomerase (EC 5.3.1.33) from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
PFams: TIM
263 amino acids: PaperBLAST, CDD, SwissProt::A0R756
47% identical to

Q7X216 triose-phosphate isomerase (EC 5.3.1.1) from Klebsiella pneumoniae
PFams: TIM
265 amino acids: PaperBLAST, CDD