GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for KDF-hydrolase (2,4-diketo-3-deoxy-L-fuconate hydrolase) in L-fucose catabolism

Or see other characterized proteins similar to KDF-hydrolase

Or see all steps for L-fucose catabolism

Or cluster curated proteins matching a keyword

Definition of KDF-hydrolase

Fetched 5 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 5 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by cluster

Burkholderia phytofirmans

BPHYT_RS34210 2,4-diketo-3-deoxy-L-rhamnonate hydrolase (EC 3.7.1.-) from Burkholderia phytofirmans PsJN
PFams: FAA_hydrolase
282 amino acids: PaperBLAST, CDD (Cluster 1)

Organism unknown

A0A2E7P912 FAA hydrolase family protein
281 amino acids: PaperBLAST, CDD (Cluster 1)

D8INW0 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (Catechol pathway) protein; EC=
281 amino acids: PaperBLAST, CDD (Cluster 1)

Sinorhizobium meliloti

SM_b21112 L-2,4-diketo-3-deoxyrhamnonate hydrolase; 2,4-dioxopentanoate hydrolase from Sinorhizobium meliloti 1021
PFams: FAA_hydrolase
281 amino acids: PaperBLAST, CDD (Cluster 1)

Sphingomonas (strain

Q1NEI7 L-2-keto-3-deoxyrhamnonate 4-dehydrogenase subunit (EC from Sphingomonas sp. (strain SKA58)
PFams: FAA_hydrolase
285 amino acids: PaperBLAST, CDD (Cluster 1)