Other Characterized Proteins Similar to fdh

Finding the characterized proteins for fdh (L-fucose 1-dehydrogenase) in L-fucose catabolism

Or see clustering for step fdh

Or see all steps for L-fucose catabolism

Or cluster curated proteins matching a keyword

Definition of fdh

• Curated proteins or TIGRFams with EC 1.1.1.122
• UniProt sequence A0A2E7P8M8: SubName: Full=Short-chain dehydrogenase {ECO:0000313|EMBL:MBO18054.1};
• Comment: C785_RS21215 (A0A2E7P8M8) was shown to be a L-fucose dehydrogenase (PMC6336799)

Fetched 5 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 2 other characterized sequences. (Found 6 hits including self hits.)

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for fdh.)

PLD_MICLT / Q76KC2 Pyridoxal 4-dehydrogenase; EC 1.1.1.107 from Microbacterium luteolum (Aureobacterium luteolum)
PFams: Aldo_ket_red
342 amino acids: PaperBLAST, CDD, SwissProt::Q76KC2
51% identical to

BPHYT_RS34225 L-fucose dehydrogenase (EC 1.1.1.122) from Burkholderia phytofirmans PsJN
PFams: Aldo_ket_red
346 amino acids: PaperBLAST, CDD

SMc02775 D-arabinose 1-dehydrogenase from Sinorhizobium meliloti 1021
PFams: Aldo_ket_red
339 amino acids: PaperBLAST, CDD, reanno::Smeli:SMc02775
52% identical to

BPHYT_RS34225 L-fucose dehydrogenase (EC 1.1.1.122) from Burkholderia phytofirmans PsJN
PFams: Aldo_ket_red
346 amino acids: PaperBLAST, CDD