Other Characterized Proteins Similar to fucD

Finding the characterized proteins for fucD (L-fuconate dehydratase) in L-fucose catabolism

Or see clustering for step fucD

Or see all steps for L-fucose catabolism

Or cluster curated proteins matching a keyword

Definition of fucD

• Curated proteins or TIGRFams with EC 4.2.1.68
• UniProt sequence D8J108: RecName: Full=L-fuconate dehydratase {ECO:0000256|ARBA:ARBA00014265}; EC=4.2.1.68 {ECO:0000256|ARBA:ARBA00013142};
• Ignore hits to BPHYT_RS34235 when looking for 'other' hits (putative accessory domain for L-fuconate/L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90))
• Comment: HSERO_RS05235 (D8J108) is important for fucose utilization. Ignore the putative accessory protein BPHYT_RS34235.

Fetched 5 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 1 other characterized sequences. (Found 5 hits including self hits.)

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for fucD.)

Q0QWS4 L-galactonate dehydratase (EC 4.2.1.146) from Hypocrea jecorina
LGD1_HYPJE / Q0QWS4 L-galactonate dehydratase; EC 4.2.1.146 from Hypocrea jecorina (Trichoderma reesei)
Q0QWS4 L-galactonate dehydratase (EC 4.2.1.146) from Trichoderma reesei
PFams: MR_MLE_C
450 amino acids: PaperBLAST, CDD, SwissProt::Q0QWS4
76% identical to

G3Y683 L-fuconate dehydratase (EC 4.2.1.68) from Aspergillus niger
PFams: MR_MLE_N, MR_MLE_C
452 amino acids: PaperBLAST, CDD