GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for fucI (L-fucose isomerase FucI) in L-fucose catabolism

Or see other characterized proteins similar to fucI

Or see all steps for L-fucose catabolism

Or cluster curated proteins matching a keyword

Definition of fucI

Fetched 4 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 4 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by cluster

Aeribacillus pallidus

C0SSE7 L-fucose isomerase (EC 5.3.1.25); D-arabinose isomerase (EC 5.3.1.3) from Aeribacillus pallidus
PFams: Fucose_iso_N1, Fucose_iso_N2, Fucose_iso_C
595 amino acids: PaperBLAST, CDD (Cluster 1)

Caldicellulosiruptor saccharolyticus

A4XJ56 L-fucose isomerase (EC 5.3.1.25); D-arabinose isomerase (EC 5.3.1.3) from Caldicellulosiruptor saccharolyticus
PFams: Fucose_iso_N1, Fucose_iso_N2, Fucose_iso_C
604 amino acids: PaperBLAST, CDD (Cluster 1)

Dictyoglomus turgidum

B8E1T1 L-fucose isomerase (EC 5.3.1.25) from Dictyoglomus turgidum
PFams: Fucose_iso_N1, Fucose_iso_N2, Fucose_iso_C
606 amino acids: PaperBLAST, CDD (Cluster 1)

Escherichia coli

b2802 L-fucose isomerase (EC 5.3.1.25; EC 5.3.1.3) from Escherichia coli K-12 substr. MG1655
FUCI_ECOLI / P69922 L-fucose isomerase; FucIase; 6-deoxy-L-galactose isomerase; D-arabinose isomerase; EC 5.3.1.25; EC 5.3.1.3 from Escherichia coli (strain K12)
P69922 L-fucose isomerase (EC 5.3.1.25) from Escherichia coli
P69922 L-fucose isomerase (EC 5.3.1.25; EC 5.3.1.3) from Escherichia coli (strain K12)
RF|NP_417282 FucIase; EC 5.3.1.25 from Escherichia coli K12
PFams: Fucose_iso_N1, Fucose_iso_N2, Fucose_iso_C
591 amino acids: PaperBLAST, CDD (Cluster 1)