GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for fuconolactonase (L-fucono-1,5-lactonase) in L-fucose catabolism

Or see other characterized proteins similar to fuconolactonase

Or see all steps for L-fucose catabolism

Or cluster curated proteins matching a keyword

Definition of fuconolactonase

Fetched 4 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 4 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 276-296 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

B2T9V4 Amidohydrolase 2
276 amino acids: PaperBLAST, CDD, Compare to cluster

A0A0H3KNC4 Putative amidohydrolase
296 amino acids: PaperBLAST, CDD, Compare to cluster

D8J114 Metal-dependent hydrolase of the TIM-barrel fold protein
289 amino acids: PaperBLAST, CDD, Compare to cluster

SM_b21101 L-fucono-1,5-lactonase; D-arabinolactonase from Sinorhizobium meliloti 1021
PFams: Amidohydro_2
278 amino acids: PaperBLAST, CDD, Compare to cluster