GapMind for catabolism of small carbon sources

 

Other Characterized Proteins Similar to dauA

Finding the characterized proteins for dauA (fumarate transporter DauA) in fumarate catabolism

Or see clustering for step dauA

Or see all steps for fumarate catabolism

Or cluster curated proteins matching a keyword

Definition of dauA

Fetched 1 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 1 other characterized sequences. (Found 2 hits including self hits.)

Removing ignored items reduces this to 0 close sequences.

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for dauA.)

TC 2.A.53.3.9 / A1JRS3 SulP homologue. The low resolution structure is available from Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081)
PFams: Sulfate_transp, STAS
565 amino acids: PaperBLAST, CDD, TCDB::A1JRS3
72% identical to

b1206 aerobic C4-dicarboxylate transporter DauA from Escherichia coli K-12 substr. MG1655
P0AFR2 aerobic C4-dicarboxylate transporter DauA from Escherichia coli (strain K12)
DAUA_ECOLI / P0AFR2 C4-dicarboxylic acid transporter DauA; Dicarboxylic acid uptake system A from Escherichia coli (strain K12)
TC 2.A.53.3.11 / P0AFR2 Bicarbonate transporter, DauA (YchM). Also transports dicarboxylic acids including fumarate, aspartate and succinate, and is therefore designated the dicarboxylic acid uptake system A (DauA) (Karinou et al. 2013) It is the only succinate uptake porter at acidic pHs. The STAS domain forms a complex with the acyl carrier protein, ACP and malonyl-ACP, and the complex has been determined by x-ray crystallography (PDB# 3NY7) from Escherichia coli (strain K12)
PFams: Sulfate_transp, STAS
559 amino acids: PaperBLAST, CDD