GapMind for catabolism of small carbon sources


Other Characterized Proteins Similar to dctM

Finding the characterized proteins for dctM (fumarate TRAP transporter, large permease component DctM) in fumarate catabolism

Or see clustering for step dctM

Or see all steps for fumarate catabolism

Or cluster curated proteins matching a keyword

Definition of dctM

Fetched 4 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 1 other characterized sequences. (Found 4 hits including self hits.)

Removing ignored items reduces this to 0 close sequences.

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for dctM.)

Sama_2211 alpha-ketoglutarate TRAP transporter, large permease component from Shewanella amazonensis SB2B
PFams: DctM
Heteromeric, 466 amino acids: PaperBLAST, CDD, reanno::SB2B:6938090
89% identical to

Shew_1444 dicarboxylate TRAP transporter (succinate, fumarate, L-malate, and alpha-ketoglutarate), large permease component from Shewanella loihica PV-4
PFams: DctM
Heteromeric, 465 amino acids: PaperBLAST, CDD