Finding the characterized proteins for dctP (fumarate TRAP transporter, substrate-binding component DctP) in fumarate catabolism
Or see clustering for step dctP
Or see all steps for fumarate catabolism
Or cluster curated proteins matching a keyword
Definition of dctP
Fetched 5 sequences
Running ublast to find other characterized proteins with 40% identity and 70% coverage
Found hits to 2 other characterized sequences. (Found 6 hits including self hits.)
Removing ignored items reduces this to 1 close sequences.
(Sequences that are similar to these will not be high-confidence candidates for dctP.)
DCTB_BACSU / P96600 C4-dicarboxylate-binding protein DctB from Bacillus subtilis (strain 168)
PFams: DctP
350 amino acids: PaperBLAST, CDD, SwissProt::P96600
41% identical to
DCTP_RHOCA / P37735 C4-dicarboxylate-binding periplasmic protein DctP from Rhodobacter capsulatus (Rhodopseudomonas capsulata)
TC 2.A.56.1.1 / P37735 DctP, component of Tripartite dicarboxylate:H+ symporter (substrates include: fumarate, D- and L-malate, succinate, succinamide, orotate, iticonate and mesaconate) from Rhodobacter capsulatus (Rhodopseudomonas capsulata)
PFams: DctP
Heteromeric, 333 amino acids: PaperBLAST, CDD
(Sequences that are similar to these will still be high-confidence candidates for dctP.)
Sama_2209 alpha-ketoglutarate TRAP transporter, solute receptor component from Shewanella amazonensis SB2B
PFams: DctP
Heteromeric, 339 amino acids: PaperBLAST, CDD, reanno::SB2B:6938088
79% identical to
Shew_1446 dicarboxylate TRAP transporter (succinate, fumarate, L-malate, and alpha-ketoglutarate), solute receptor component from Shewanella loihica PV-4
DCTP_SHELP / A3QCW5 C4-dicarboxylate-binding periplasmic protein DctP from Shewanella loihica (strain ATCC BAA-1088 / PV-4)
PFams: DctP
Heteromeric, 336 amino acids: PaperBLAST, CDD