Clusters of Characterized Proteins

GapMind for catabolism of small carbon sources

Clusters of Characterized Proteins

Clustering the characterized proteins for BPHYT_RS16930 (galactose ABC transporter, ATPase component) in D-galactose catabolism

Or see other characterized proteins similar to BPHYT_RS16930

Or see all steps for D-galactose catabolism

Or cluster curated proteins matching a keyword

Definition of BPHYT_RS16930

UniProt sequence B2SYR5: RecName: Full=Arabinose import ATP-binding protein AraG {ECO:0000256|HAMAP-Rule:MF_01721}; EC=7.5.2.12 {ECO:0000256|HAMAP-Rule:MF_01721};
UniProt sequence A0A165ZSX8: RecName: Full=Arabinose import ATP-binding protein AraG {ECO:0000256|HAMAP-Rule:MF_01721}; EC=7.5.2.12 {ECO:0000256|HAMAP-Rule:MF_01721};
Comment: BPHYT_RS16930 = B2SYR5; Pf6N2E2_5969 = A0A165ZSX8

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 512-514 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

A0A165ZSX8 Arabinose import ATP-binding protein AraG {ECO:0000256|HAMAP-Rule:MF_01721}; EC=7.5.2.12 {ECO:0000256|HAMAP-Rule:MF_01721}
514 amino acids: PaperBLAST, CDD, Compare to cluster

B2SYR5 Arabinose import ATP-binding protein AraG {ECO:0000256|HAMAP-Rule:MF_01721}; EC=7.5.2.12 {ECO:0000256|HAMAP-Rule:MF_01721}
512 amino acids: PaperBLAST, CDD, Compare to cluster