Clusters of Characterized Proteins

Clustering the characterized proteins for BPHYT_RS16935 (galactose ABC transporter, substrate-binding component) in D-galactose catabolism

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Definition of BPHYT_RS16935

• UniProt sequence B2SYR6: RecName: Full=L-arabinose-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR002816}; Short=ABP {ECO:0000256|PIRNR:PIRNR002816}; Flags: Precursor;
• UniProt sequence A0A161H4E4: RecName: Full=L-arabinose-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR002816}; Short=ABP {ECO:0000256|PIRNR:PIRNR002816};
• Comment: Burkholderia phytofirmans and some other Pseudomonas fluorescens (such as FW300-N2E2) have a 3-part galactose transporter. It is related to araFGH and also transports L-arabinose. BPHYT_RS16935 = B2SYR6; Pf6N2E2_5968 = A0A161H4E4

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 332-334 amino acids (not heteromeric)

A0A161H4E4 L-arabinose-binding periplasmic protein; Short=ABP
334 amino acids: PaperBLAST, CDD, Compare to cluster

B2SYR6 L-arabinose-binding periplasmic protein; Short=ABP; Flags: Precursor
332 amino acids: PaperBLAST, CDD, Compare to cluster