Other Characterized Proteins Similar to PfGW456L13_1894

Finding the characterized proteins for PfGW456L13_1894 (ABC transporter for D-Galactose and D-Glucose, periplasmic substrate-binding component) in D-galactose catabolism

Or see clustering for step PfGW456L13_1894

Or see all steps for D-galactose catabolism

Or cluster curated proteins matching a keyword

Definition of PfGW456L13_1894

• Curated sequence PfGW456L13_1894: ABC transporter for D-Galactose and D-Glucose, periplasmic substrate-binding component
• Ignore hits to GFF4324 when looking for 'other' hits (ABC transporter for D-Glucose-6-Phosphate, periplasmic substrate-binding component)
• Ignore hits to Q88P38 when looking for 'other' hits (GtsA (GLcE), component of Glucose porter, GtsABCD)
• Comment: Pseudomonas fluorescens has a 4-part transporter. A related system in P. simiae WCS417 is slightly deleterious during growth on galactose, so it could be a galactose transporter; it is marked ignore. A related system is also found in P. putida (gtsABCD), which does not utilize galactose, but similar systems in other Pseudomonas do seem to be involved in galactose transport (i.e., AO356_05195:AO356_05180 from FW300-N2C3), so gtsABCD is also marked ignore..

Fetched 1 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 2 other characterized sequences. (Found 3 hits including self hits.)

Removing ignored items reduces this to 0 close sequences.

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for PfGW456L13_1894.)

PS417_22145 ABC transporter for D-Glucose-6-Phosphate, periplasmic substrate-binding component from Pseudomonas simiae WCS417
Heteromeric, 428 amino acids: PaperBLAST, CDD, reanno::WCS417:GFF4324
79% identical to

PfGW456L13_1894 ABC transporter for D-Galactose and D-Glucose, periplasmic substrate-binding component from Pseudomonas fluorescens GW456-L13
Heteromeric, 432 amino acids: PaperBLAST, CDD

TC 3.A.1.1.30 / Q88P38 GtsA (GLcE), component of Glucose porter, GtsABCD from Pseudomonas putida (strain KT2440)
Heteromeric, 428 amino acids: PaperBLAST, CDD, TCDB::Q88P38
76% identical to

PfGW456L13_1894 ABC transporter for D-Galactose and D-Glucose, periplasmic substrate-binding component from Pseudomonas fluorescens GW456-L13
Heteromeric, 432 amino acids: PaperBLAST, CDD