GapMind for catabolism of small carbon sources

 

Other Characterized Proteins Similar to ptcA

Finding the characterized proteins for ptcA (galactose PTS system, EIIA component) in D-galactose catabolism

Or see clustering for step ptcA

Or see all steps for D-galactose catabolism

Or cluster curated proteins matching a keyword

Definition of ptcA

Fetched 1 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 5 other characterized sequences. (Found 6 hits including self hits.)

Removing ignored items reduces this to 4 close sequences.

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for ptcA.)

TC 4.A.3.2.8 / Q72XQ1 PTS system, cellobiose-specific IIA component, component of N-, N'-diacetylchitobiose PTS permease, IIABCChb from Bacillus cereus (strain ATCC 10987)
PFams: PTS_IIA
Heteromeric, 105 amino acids: PaperBLAST, CDD, TCDB::Q72XQ1
54% identical to

PTCA_LACLM / A2RIE7 PTS system galactose-specific EIIA component from Lactococcus lactis subsp. cremoris (strain MG1363)
PFams: PTS_IIA
116 amino acids: PaperBLAST, CDD

Q45402 protein-Npi-phosphohistidine-cellobiose phosphotransferase (EC 2.7.1.205) from Geobacillus stearothermophilus
PFams: PTS_IIA
108 amino acids: PaperBLAST, CDD, BRENDA::Q45402
50% identical to

PTCA_LACLM / A2RIE7 PTS system galactose-specific EIIA component from Lactococcus lactis subsp. cremoris (strain MG1363)
PFams: PTS_IIA
116 amino acids: PaperBLAST, CDD

TC 4.A.3.2.2 / P46319 PTCA aka LicA aka CELC, component of Lichenan oligosaccharide (Lic) porter from Bacillus subtilis
PFams: PTS_IIA
Heteromeric, 110 amino acids: PaperBLAST, CDD, TCDB::P46319
45% identical to

PTCA_LACLM / A2RIE7 PTS system galactose-specific EIIA component from Lactococcus lactis subsp. cremoris (strain MG1363)
PFams: PTS_IIA
116 amino acids: PaperBLAST, CDD

TC 4.A.3.2.6 / Q9KSH3 VC_1283 aka IIA, component of Glucosamine β(1→4) glucosamine (GlcN)2 (glucosamine dimer) transporter, VC1281-1283 (IIB; IIC; IIA, respectively) from Vibrio cholerae
PFams: PTS_IIA
Heteromeric, 111 amino acids: PaperBLAST, CDD, TCDB::Q9KSH3
41% identical to

PTCA_LACLM / A2RIE7 PTS system galactose-specific EIIA component from Lactococcus lactis subsp. cremoris (strain MG1363)
PFams: PTS_IIA
116 amino acids: PaperBLAST, CDD

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for ptcA.)

PTCA_LACLA / Q9CIE9 PTS system cellobiose-specific EIIA component from Lactococcus lactis subsp. lactis (strain IL1403) (Streptococcus lactis)
TC 4.A.3.2.4 / Q9CIE9 PtcA, component of The cellobiose-specific (PtcA-PtcB-CelB) porter (Kowalczyk et al., 2008 ) from Lactococcus lactis subsp. lactis (Streptococcus lactis)
PFams: PTS_IIA
Heteromeric, 116 amino acids: PaperBLAST, CDD, SwissProt::Q9CIE9
97% identical to

PTCA_LACLM / A2RIE7 PTS system galactose-specific EIIA component from Lactococcus lactis subsp. cremoris (strain MG1363)
PFams: PTS_IIA
116 amino acids: PaperBLAST, CDD