GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for gatA (D-galacturonate transporter gatA) in D-galacturonate catabolism

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Definition of gatA

Fetched 1 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 0 of these sequences

Found 0 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Singletons (0/1 heteromeric)

TC 2.A.1.1.119 / A2R3H2 The galacturonic acid (galacturonate) uptake porter, GatA, of 518 aas and 12 TMSs from Aspergillus niger (strain CBS 513.88 / FGSC A1513)
PFams: Sugar_tr, MFS_1
518 amino acids: PaperBLAST, CDD