Other Characterized Proteins Similar to gntB

Finding the characterized proteins for gntB (gluconate TRAP transporter, large permease component) in D-gluconate catabolism

Or see clustering for step gntB

Or see all steps for D-gluconate catabolism

Or cluster curated proteins matching a keyword

Definition of gntB

• UniProt sequence Q930R2: SubName: Full=TRAP-type large permease component {ECO:0000313|EMBL:AAK64791.1};
• Curated sequence AZOBR_RS15920: Large component of TRAP-type D-gluconate transporter
• Curated sequence GFF2081: D-gluconate TRAP transporter, large permease component
• UniProt sequence A0A165IWV9: SubName: Full=L-dehydroascorbate transporter large permease subunit {ECO:0000313|EMBL:KZT13641.1};

Fetched 4 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 3 other characterized sequences. (Found 5 hits including self hits.)

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for gntB.)

TC 2.A.56.1.9 / R4JQ65 TRAP transporter DctM subunit, component of The possible disulfide 3,3'-dithiodipropionic acid (DTDP) tripartite transporter, DctMPQ from Advenella mimigardefordensis DPN7
PFams: DctM
Heteromeric, 426 amino acids: PaperBLAST, CDD, TCDB::R4JQ65
62% identical to

AZOBR_RS15920 Large component of TRAP-type D-gluconate transporter from Azospirillum brasilense Sp245
PFams: DctM
Heteromeric, 426 amino acids: PaperBLAST, CDD

b3578 2,3-diketo-L-gulonate:Na⁺ symporter - membrane subunit from Escherichia coli K-12 substr. MG1655
YIAN_ECOLI / P37675 2,3-diketo-L-gulonate TRAP transporter large permease protein YiaN from Escherichia coli (strain K12)
TC 2.A.56.1.2 / P37675 YiaN, component of The 2,3-diketo-L-gulonate (2,3-DKG) transporter, YiaMNO [2,3-KDG is a breakdown product of L-ascorbate] from Escherichia coli
PFams: DctM
Heteromeric, 425 amino acids: PaperBLAST, CDD, SwissProt::P37675
54% identical to

Psest_2124 D-gluconate TRAP transporter, large permease component from Pseudomonas stutzeri RCH2
PFams: DctM
Heteromeric, 425 amino acids: PaperBLAST, CDD

SIAM_VIBCH / Q9KR66 Sialic acid TRAP transporter large permease protein SiaM from Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
TC 2.A.56.1.6 / B9TSM9 TRAP dicarboxylate transporter DctM subunit, component of The Na+-dependent sialic acid uptake porter, SiaPQM. SiaQ and SiaM form a 1:1 stoichiometric complex from Vibrio cholerae
PFams: DctM
Heteromeric, 427 amino acids: PaperBLAST, CDD, SwissProt::Q9KR66
41% identical to

Psest_2124 D-gluconate TRAP transporter, large permease component from Pseudomonas stutzeri RCH2
PFams: DctM
Heteromeric, 425 amino acids: PaperBLAST, CDD