GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for AO353_21720 (glucosaminate ABC transporter, permease component 2) in D-glucosamine (chitosamine) catabolism

Or see other characterized proteins similar to AO353_21720

Or see all steps for D-glucosamine (chitosamine) catabolism

Or cluster curated proteins matching a keyword

Definition of AO353_21720

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 220-220 amino acids (heteromeric)

The first sequence in each cluster is the seed.

AO353_21720 ABC transporter for D-glucosamine, permease component 2 from Pseudomonas fluorescens FW300-N2E3
PFams: BPD_transp_1
Heteromeric, 220 amino acids: PaperBLAST, CDD, Compare to cluster

AO356_00470 ABC transporter for D-Glucosamine, permease component 1 from Pseudomonas fluorescens FW300-N2C3
Pf6N2E2_2051 ABC transporter for D-Glucosamine Hydrochloride, permease component 1 from Pseudomonas fluorescens FW300-N2E2
PFams: BPD_transp_1
Heteromeric, 220 amino acids: PaperBLAST, CDD, Compare to cluster