GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for glucosaminate-lyase (glucosaminate ammonia-lyase) in D-glucosamine (chitosamine) catabolism

Or see other characterized proteins similar to glucosaminate-lyase

Or see all steps for D-glucosamine (chitosamine) catabolism

Or cluster curated proteins matching a keyword

Definition of glucosaminate-lyase

Fetched 5 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 5 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 402-405 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

A0A1N7U313 glucosaminate ammonia-lyase (EC 4.3.1.9) from Pseudomonas simiae
PS417_12125 D-glucosaminate dehydratase (EC 4.3.1.9) from Pseudomonas simiae WCS417
PFams: Ala_racemase_N, D-ser_dehydrat
402 amino acids: PaperBLAST, CDD, Compare to cluster

PfGW456L13_2867 D-glucosaminate dehydratase (EC 4.3.1.9) from Pseudomonas fluorescens GW456-L13
PFams: Ala_racemase_N, D-ser_dehydrat
405 amino acids: PaperBLAST, CDD, Compare to cluster

AO353_21740 D-glucosaminate dehydratase (EC 4.3.1.9) from Pseudomonas fluorescens FW300-N2E3
PFams: Ala_racemase_N, D-ser_dehydrat
405 amino acids: PaperBLAST, CDD, Compare to cluster

AO356_00450 D-glucosaminate dehydratase (EC 4.3.1.9) from Pseudomonas fluorescens FW300-N2C3
PFams: Ala_racemase_N, D-ser_dehydrat
405 amino acids: PaperBLAST, CDD, Compare to cluster

Pf6N2E2_2047 D-glucosaminate dehydratase (EC 4.3.1.9) from Pseudomonas fluorescens FW300-N2E2
PFams: Ala_racemase_N, D-ser_dehydrat
405 amino acids: PaperBLAST, CDD, Compare to cluster