GapMind for catabolism of small carbon sources

 

Other Characterized Proteins Similar to kdgA

Finding the characterized proteins for kdgA (2-keto-3-deoxygluconate-6-phosphate aldolase EC:4.1.2.14) in D-glucosamine (chitosamine) catabolism

Or see clustering for step kdgA

Or see all steps for D-glucosamine (chitosamine) catabolism

Or cluster curated proteins matching a keyword

Definition of kdgA

Fetched 9 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 5 other characterized sequences. (Found 14 hits including self hits.)

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for kdgA.)

Q00384 2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.14) from Zymomonas mobilis subsp. molbilis
PFams: Aldolase
208 amino acids: PaperBLAST, CDD, BRENDA::Q00384
53% identical to

b1850 KHG/KDPG aldolase (EC 4.1.2.55; EC 4.1.2.14; EC 4.1.3.42; EC 4.1.1.112) from Escherichia coli K-12 substr. MG1655
P0A955 KHG/KDPG aldolase (EC 4.1.2.55; EC 4.1.3.42; EC 4.1.1.112) from Escherichia coli (strain K12)
ALKH_ECOLI / P0A955 KHG/KDPG aldolase; EC 4.1.3.16; EC 4.1.2.14 from Escherichia coli (strain K12)
P0A955 2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.14); 4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16); (4S)-4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.42) from Escherichia coli
RF|NP_416364 KHG/KDPG aldolase; EC 4.1.2.14; EC 4.1.3.16 from Escherichia coli K12
PFams: Aldolase
213 amino acids: PaperBLAST, CDD

Q0K1X1 2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.14) from Cupriavidus necator
PFams: Aldolase
214 amino acids: PaperBLAST, CDD, BRENDA::Q0K1X1
49% identical to

P38448 2-dehydro-3-deoxy-D-gluconate-6-phosphate aldolase (EC 4.1.2.55) from Dickeya dadantii (strain 3937)
PFams: Aldolase
213 amino acids: PaperBLAST, CDD

DGOA_RHIME / Q92RN8 Probable 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; 2-oxo-3-deoxygalactonate 6-phosphate aldolase; 6-phospho-2-dehydro-3-deoxygalactonate aldolase; 6-phospho-2-keto-3-deoxygalactonate aldolase; KDPGal; EC 4.1.2.21 from Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti)
PFams: Aldolase
212 amino acids: PaperBLAST, CDD, SwissProt::Q92RN8
49% identical to

b4477 2-dehydro-3-deoxy-6-phosphogalactonate aldolase (EC 4.1.2.55; EC 4.1.2.21) from Escherichia coli K-12 substr. MG1655
Q6BF16 2-dehydro-3-deoxy-6-phosphogalactonate aldolase (EC 4.1.2.55) from Escherichia coli (strain K12)
DGOA_ECOLI / Q6BF16 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; 2-oxo-3-deoxygalactonate 6-phosphate aldolase; 6-phospho-2-dehydro-3-deoxygalactonate aldolase; 6-phospho-2-keto-3-deoxygalactonate aldolase; KDPGal; EC 4.1.2.21 from Escherichia coli (strain K12)
Q6BF16 2-dehydro-3-deoxy-6-phosphogalactonate aldolase (EC 4.1.2.21) from Escherichia coli
RF|YP_026238 2-dehydro-3-deoxy-6-phosphogalactonate aldolase from Escherichia coli K12
PFams: Aldolase
205 amino acids: PaperBLAST, CDD

A4VVI7 2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.14) from Streptococcus suis
PFams: Aldolase
210 amino acids: PaperBLAST, CDD, BRENDA::A4VVI7
45% identical to

Q9WXS1 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16; EC 4.1.2.55) from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
PFams: Aldolase
205 amino acids: PaperBLAST, CDD

KDGA_THETE / Q704D1 2-dehydro-3-deoxy-D-gluconate/2-dehydro-3-deoxy-phosphogluconate aldolase; KD(P)G aldolase; EC 4.1.2.14; EC 4.1.2.51 from Thermoproteus tenax
Q704D1 2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.14) from Thermoproteus tenax
PFams: DHDPS
306 amino acids: PaperBLAST, CDD, SwissProt::Q704D1
45% identical to

O54288 KDG-aldolase subunit (EC 4.1.2.28; EC 4.1.2.18; EC 4.1.2.51) from Saccharolobus solfataricus
KDGA_SACSO / O54288 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase; EC 4.1.2.55 from Saccharolobus solfataricus (Sulfolobus solfataricus)
O54288 2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.14); 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6 phosphogalactonate aldolase (EC 4.1.2.55) from Saccharolobus solfataricus
PFams: DHDPS
294 amino acids: PaperBLAST, CDD