Other Characterized Proteins Similar to nagF

GapMind for catabolism of small carbon sources

Other Characterized Proteins Similar to nagF

Finding the characterized proteins for nagF (N-acetylglucosamine phosphotransferase system, E-I, Hpr, and EII-A components (NagF)) in D-glucosamine (chitosamine) catabolism

Or see clustering for step nagF

Or see all steps for D-glucosamine (chitosamine) catabolism

Or cluster curated proteins matching a keyword

Definition of nagF

Curated sequence BPHYT_RS02740: N-acetylglucosamine-specific PTS system, I, HPr, and IIA components (nagF)
Curated sequence AO353_04460: N-acetylglucosamine-specific PTS system, I, HPr, and IIA components (nagF)
Curated sequence AO356_17540: N-acetylglucosamine-specific PTS system, I, HPr, and IIA components (nagF)
Curated sequence Q9HXN5: N-Acetyl-D-Glucosamine phosphotransferase system transporter, component of N-acetyl glucosamine-specific PTS permease, GlcNAc IIBC/GlcNAc I-HPr-IIA
Comment: nagFE, where nagF has PTS I, Hpr, and II-A, and nagE has II-CB (in Burkholderia phytofirmans and two Pseudomonas fluorescens, and in P. aeruginosa)

Fetched 4 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 10 other characterized sequences. (Found 14 hits including self hits.)

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for nagF.)

PS417_23035 D-trehalose PTS system, I, HPr, and IIA components from Pseudomonas simiae WCS417
PFams: PTS_EIIA_1, PTS-HPr, PEP-utilisers_N, PEP-utilizers, PEP-utilizers_C
Heteromeric, 838 amino acids: PaperBLAST, CDD, reanno::WCS417:GFF4500
46% identical to

TC 4.A.1.1.15 / Q9HXN5 N-Acetyl-D-Glucosamine phosphotransferase system transporter, component of N-acetyl glucosamine-specific PTS permease, GlcNAc IIBC/GlcNAc I-HPr-IIA from Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
PFams: PTS_EIIA_1, PTS-HPr, PEP-utilisers_N, PEP-utilizers, PEP-utilizers_C
Heteromeric, 842 amino acids: PaperBLAST, CDD

AO353_15995 trehalose-specific PTS system, I, HPr, and IIA components from Pseudomonas fluorescens FW300-N2E3
PFams: PTS_EIIA_1, PTS-HPr, PEP-utilisers_N, PEP-utilizers, PEP-utilizers_C
Heteromeric, 844 amino acids: PaperBLAST, CDD, reanno::pseudo3_N2E3:AO353_15995
45% identical to

AZOBR_RS32325 Fructose PTS system (E-I, HPr, and E-IIA components) from Azospirillum brasilense Sp245
PFams: PTS_EIIA_2, PTS-HPr, PEP-utilisers_N, PEP-utilizers, PEP-utilizers_C
Heteromeric, 846 amino acids: PaperBLAST, CDD, reanno::azobra:AZOBR_RS32325
41% identical to

PTFAX_XANCP / P45597 Multiphosphoryl transfer protein; MTP; Triphosphoryl transfer protein; TTP; EC 2.7.3.9 from Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)
PFams: PTS_EIIA_2, PTS-HPr, PEP-utilisers_N, PEP-utilizers, PEP-utilizers_C
838 amino acids: PaperBLAST, CDD, SwissProt::P45597
41% identical to

BPHYT_RS02740 N-acetylglucosamine-specific PTS system, I, HPr, and IIA components (nagF) from Burkholderia phytofirmans PsJN
PFams: PTS_EIIA_1, PTS-HPr, PEP-utilisers_N, PEP-utilizers, PEP-utilizers_C
Heteromeric, 854 amino acids: PaperBLAST, CDD

Pf1N1B4_1146 Phosphoenolpyruvate--protein phosphotransferase (EC 2.7.3.9) from Pseudomonas fluorescens FW300-N1B4
PFams: PTS_EIIA_2, PTS-HPr, PEP-utilisers_N, PEP-utilizers, PEP-utilizers_C
953 amino acids: PaperBLAST, CDD, reanno::pseudo1_N1B4:Pf1N1B4_1146
42% identical to

AO356_07335 Phosphoenolpyruvate--protein phosphotransferase (EC 2.7.3.9) from Pseudomonas fluorescens FW300-N2C3
PFams: PTS_EIIA_2, PTS-HPr, PEP-utilisers_N, PEP-utilizers, PEP-utilizers_C
954 amino acids: PaperBLAST, CDD, reanno::pseudo5_N2C3_1:AO356_07335
42% identical to

TC 4.A.2.1.17 / Q9HY55 Phosphotransferase system transporter enzyme I, FruI, component of Fructose-specific PTS permease, FruIIBC/FruI-HPr-IIA from Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
PFams: PTS_EIIA_2, PTS-HPr, PEP-utilisers_N, PEP-utilizers, PEP-utilizers_C
Heteromeric, 956 amino acids: PaperBLAST, CDD, TCDB::Q9HY55
42% identical to

PS417_03965 Phosphoenolpyruvate--protein phosphotransferase (EC 2.7.3.9) from Pseudomonas simiae WCS417
PFams: PTS_EIIA_2, PTS-HPr, PEP-utilisers_N, PEP-utilizers, PEP-utilizers_C
952 amino acids: PaperBLAST, CDD, reanno::WCS417:GFF780
41% identical to

AO353_05485 Fructose-specific PTS system, I, HPr, and IIA components from Pseudomonas fluorescens FW300-N2E3
PFams: PTS_EIIA_2, PTS-HPr, PEP-utilisers_N, PEP-utilizers, PEP-utilizers_C
Heteromeric, 953 amino acids: PaperBLAST, CDD, reanno::pseudo3_N2E3:AO353_05485
42% identical to

Psest_3355 Phosphoenolpyruvate--protein phosphotransferase (EC 2.7.3.9) from Pseudomonas stutzeri RCH2
PFams: PTS_EIIA_2, PTS-HPr, PEP-utilisers_N, PEP-utilizers, PEP-utilizers_C
960 amino acids: PaperBLAST, CDD, reanno::psRCH2:GFF3291
40% identical to