GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for ptsC (N-acetylglucosamine phosphotransferase system, EII-C component PtsC) in D-glucosamine (chitosamine) catabolism

Or see other characterized proteins similar to ptsC

Or see all steps for D-glucosamine (chitosamine) catabolism

Or cluster curated proteins matching a keyword

Definition of ptsC

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 403-416 amino acids (1/2 heteromeric)

The first sequence in each cluster is the seed.

PTWC_STRCO / Q9S2H4 PTS system N-acetylglucosamine-specific EIIC component; PTS system GlcNAc-specific EIIC component; GlcNAc-specific transporter; N-acetylglucosamine permease IIC component; GlcNAc permease IIC component from Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
416 amino acids: PaperBLAST, CDD, Compare to cluster

TC 4.A.1.1.5 / Q8GBT6 IIC' aka PtsC2, component of N-Acetylglucosamine (NAG) porter (PtsBC1C2)(also may facilitate xylose transport) from Streptomyces olivaceoviridis (Streptomyces corchorusii)
Heteromeric, 403 amino acids: PaperBLAST, CDD, Compare to cluster