GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for gadh3 (gluconate 2-dehydrogenase subunit 3) in D-glucose catabolism

Or see other characterized proteins similar to gadh3

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Or cluster curated proteins matching a keyword

Definition of gadh3

Fetched 4 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 4 of these sequences

Found 1 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by cluster

Organism unknown

A4PIA9 Gluconate 2-dehydrogenase small subunit
242 amino acids: PaperBLAST, CDD (Cluster 1)

Q5FRK3 Gluconate 2-dehydrogenase gamma chain; EC=
236 amino acids: PaperBLAST, CDD (Singleton 1)

Pantoea cypripedii

O34213 gluconate 2-dehydrogenase subunit 3 (EC from Pantoea cypripedii
GADH3_PANCY / O34213 Gluconate 2-dehydrogenase subunit 3; GA 2-DH subunit 3; GADH subunit 3; EC from Pantoea cypripedii (Pectobacterium cypripedii) (Erwinia cypripedii)
PFams: Gluconate_2-dh3
Heteromeric, 220 amino acids: PaperBLAST, CDD (Cluster 1)

Pseudomonas fluorescens

Q4KKM8 D-gluconate dehydrogenase 21.7 kD subunit (EC from Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
PFams: Gluconate_2-dh3
Heteromeric, 251 amino acids: PaperBLAST, CDD (Cluster 1)