GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for dctP (D-glucuronate TRAP transporter, solute receptor component) in D-glucuronate catabolism

Or see other characterized proteins similar to dctP

Or see all steps for D-glucuronate catabolism

Or cluster curated proteins matching a keyword

Definition of dctP

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 323-330 amino acids (2/3 heteromeric)

The first sequence in each cluster is the seed.

DCTP_BURCM / Q0B2F6 Solute-binding protein Bamb_6123 from Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD))
PFams: DctP
Heteromeric, 328 amino acids: PaperBLAST, CDD, Compare to cluster

DCTP1_POLSJ / Q128M1 Solute-binding protein Bpro_3107 from Polaromonas sp. (strain JS666 / ATCC BAA-500)
PFams: DctP
Heteromeric, 330 amino acids: PaperBLAST, CDD, Compare to cluster

Q88NN8 TRAP dicarboxylate transporter, DctP subunit
323 amino acids: PaperBLAST, CDD, Compare to cluster