GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for uxaC (D-glucuronate isomerase) in D-glucuronate catabolism

Or see other characterized proteins similar to uxaC

Or see all steps for D-glucuronate catabolism

Or cluster curated proteins matching a keyword

Definition of uxaC

Fetched 4 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 4 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by cluster

Bacillus subtilis

UXAC_BACSU / O34808 Uronate isomerase; Glucuronate isomerase; Uronic isomerase; EC 5.3.1.12 from Bacillus subtilis (strain 168)
PFams: UxaC
473 amino acids: PaperBLAST, CDD (Cluster 1)

Escherichia coli

b3092 D-glucoronate/D-galacturonate isomerase (EC 5.3.1.12) from Escherichia coli K-12 substr. MG1655
UXAC_ECOLI / P0A8G3 Uronate isomerase; Glucuronate isomerase; Uronic isomerase; EC 5.3.1.12 from Escherichia coli (strain K12)
P0A8G3 D-glucoronate/D-galacturonate isomerase (EC 5.3.1.12) from Escherichia coli (strain K12)
RF|NP_417563 uronate isomerase from Escherichia coli K12
PFams: UxaC
470 amino acids: PaperBLAST, CDD (Cluster 1)

Pedobacter GW460-11-11-14-LB5

CA265_RS19870 Glucuronate isomerase (EC 5.3.1.12) from Pedobacter sp. GW460-11-11-14-LB5
PFams: UxaC
466 amino acids: PaperBLAST, CDD (Cluster 1)

Thermotoga maritima

Q9WXR9 hexuronate isomerase monomer (EC 5.3.1.12) from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
PFams: UxaC
451 amino acids: PaperBLAST, CDD (Cluster 1)