GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for glmE (L-glutamate mutase, E component) in L-glutamate catabolism

Or see other characterized proteins similar to glmE

Or see all steps for L-glutamate catabolism

Or cluster curated proteins matching a keyword

Definition of glmE

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 483-487 amino acids (heteromeric)

The first sequence in each cluster is the seed.

P80077 GlmE from Clostridium cochlearium
GLME_CLOCO / P80077 Glutamate mutase epsilon subunit; Glutamate mutase E chain; Glutamate mutase large subunit; Methylaspartate mutase; EC 5.4.99.1 from Clostridium cochlearium
PFams: Met_asp_mut_E
Heteromeric, 483 amino acids: PaperBLAST, CDD, Compare to cluster

GLME_CLOTT / Q05509 Glutamate mutase epsilon subunit; Glutamate mutase E chain; Glutamate mutase large subunit; Methylaspartate mutase; EC 5.4.99.1 from Clostridium tetanomorphum
Q05509 methylaspartate mutase (subunit 1/2) (EC 5.4.99.1) from Clostridium tetanomorphum
PFams: Met_asp_mut_E
Heteromeric, 485 amino acids: PaperBLAST, CDD, Compare to cluster

Q5V466 glutamate mutase β subunit (EC 5.4.99.1) from Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809)
PFams: Met_asp_mut_E
Heteromeric, 487 amino acids: PaperBLAST, CDD, Compare to cluster